BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18380 (UTR included)
(1861 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056B1G07 676 0.0
>BF01056B1G07
Length = 772
Score = 676 bits (341), Expect = 0.0
Identities = 354/358 (98%), Gaps = 4/358 (1%)
Strand = Plus / Plus
Query: 926 ctggccttattatatagagtttatacaccataaaacgccagattataaaagtgtggctga 985
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 343 ctggccttattatatagagtttatacaccataaaacg----attataaaagtgtggctga 398
Query: 986 atattgcaacatgtggcggaattaccacgatgtggctacatcatgggaggcagttaaggc 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 atattgcaacatgtggcggaattaccacgatgtggctacatcatgggaggcagttaaggc 458
Query: 1046 cattataacacactatcaaggggtatataacgatattaatggttatcacggaccaggcca 1105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 cattataacacactatcaaggggtatataacgatattaatggttatcacggaccaggcca 518
Query: 1106 ttggaatgatccagatatgttaatatttggaactaattcgctgtcggagagtcagagcag 1165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ttggaatgatccagatatgttaatatttggaactaattcgctgtcggagagtcagagcag 578
Query: 1166 agtacaaatatcagtatactcaatgcttgccgcaccgttgttgttaagctgtgacatgaa 1225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 agtacaaatatcagtatactcaatgcttgccgcaccgttgttgttaagctgtgacatgaa 638
Query: 1226 aaatattaatgattacgagaaacagatgttacttaatttagatctaatagcgataggt 1283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 aaatattaatgattacgagaaacagatgttacttaatttagatctaatagcgataggt 696
Score = 533 bits (269), Expect = e-151
Identities = 278/281 (98%)
Strand = Plus / Plus
Query: 641 tatcattattgatgattgctggtcggagagaatacgtgataaaaatggtcgtctcgtacc 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatcattattgatgattgctggtcggagagaatacgtgataaaaatggtcgtctcgtacc 60
Query: 701 agacaggacaaggtttccgagaggcatgaaatttatcgctgattatatacatgctagagg 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agacaggacaaggtttccgagaggcatgaaatttatcgctgattatatacatgctagagg 120
Query: 761 tcttaaatttggattgtacactaatgtagcggacaccacatgtatgggttatcccggttc 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcttaaatttggattgtacactaatgtagcggacaccacatgtatgggttatcccggttc 180
Query: 821 aagagatcatttcgccatcgacgccaaacagtttgcgcagtgggaaatagattatcttaa 880
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 181 aagagatcatttcgccatcgacgccaaacagtttgcacagtgggaaatagattatctaaa 240
Query: 881 agtcgatggttgttttgtcagcgaagaatatcttaatattg 921
|||||| ||||||||||||||||||||||||||||||||||
Sbjct: 241 agtcgacggttgttttgtcagcgaagaatatcttaatattg 281
Score = 73.8 bits (37), Expect = 9e-13
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 1641 ggttcaataacgctatgggtgaagccgcatttaccgc 1677
|||||||||||||||||||||||||||||||||||||
Sbjct: 736 ggttcaataacgctatgggtgaagccgcatttaccgc 772
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 303,566
Number of extensions: 8214
Number of successful extensions: 8214
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8213
Number of HSP's successfully gapped: 3
Length of query: 1861
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1844
Effective length of database: 8,119,229
Effective search space: 14971858276
Effective search space used: 14971858276
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)