BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18422 (UTR included)
(1471 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054A2C11 912 0.0
>BF01054A2C11
Length = 779
Score = 912 bits (460), Expect = 0.0
Identities = 475/480 (98%)
Strand = Plus / Plus
Query: 457 taaggaaactagctacggaacaaatagcaccattagttaaaaagatggaagacgaacaca 516
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 177 taaggaaactagctacggaacaaatagcgccattagttaaaaagatggaagacgaacaca 236
Query: 517 aaattgacgaaaccgtcagacaaatgctcttcgataatgggttaatgggcattgagacgc 576
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 aaattgacgaaaccgttagacaaatgctcttcgataatgggttaatgggcattgagacgc 296
Query: 577 cagtggagtacagcgggtcgggttgcgggttcctgaccatgatgttggttgttgaggaac 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 cagtggagtacagcgggtcgggttgcgggttcctgaccatgatgttggttgttgaggaac 356
Query: 637 tgtcgagggtggatccagctgtcgcagcgtacgtcgacattcacaacacactcgtaaatt 696
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 357 tgtcgagggtggacccagctgtggcagcgtacgtcgacattcacaacacactcgtaaatt 416
Query: 697 cgctattcatgaaattgggcaccgaagaacagaagaagaaatatttgactaacctctgca 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 cgctattcatgaaattgggcaccgaagaacagaagaagaaatatttgactaacctctgca 476
Query: 757 ccaaatacgctggcagtttttgtctgacggaacctacatcgggttctgatgccttctccc 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ccaaatacgctggcagtttttgtctgacggaacctacatcgggttctgatgccttctccc 536
Query: 817 ttaaaaccgttgcaaagaaggacggcaaggattacgtcattaatggatccaaaatgtgga 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 ttaaaaccgttgcaaagaaggacggcaaggattacgtcattaatggatccaaaatgtgga 596
Query: 877 tatcaaattccgatgtcgccggagtatttctggtcatggcgaacgctgatccctcaaaag 936
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 597 tatcaaattccgatgtcgccggagtatttctggtcatggcgaatgctgatccctcaaaag 656
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 302,678
Number of extensions: 8980
Number of successful extensions: 8980
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8980
Number of HSP's successfully gapped: 1
Length of query: 1471
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1454
Effective length of database: 8,119,229
Effective search space: 11805358966
Effective search space used: 11805358966
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)