BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18428 (UTR included)
(1471 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060B2C03 1126 0.0
BF14_1202_C1 454 e-127
>BF01060B2C03
Length = 794
Score = 1126 bits (568), Expect = 0.0
Identities = 574/576 (99%)
Strand = Plus / Plus
Query: 395 tacattgttctttgatcattattaggcatttgtaacgttactacgtataagaaaattaca 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 tacattgttctttgatcattattaggcatttgtaacgttactacgtataagaaaattaca 69
Query: 455 gcactaagtatatcacaaaactagaattgttcacgtttatttaaacatggcgacgagtat 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 gcactaagtatatcacaaaactagaattgttcacgtttatttaaacatggcgacgagtat 129
Query: 515 tccaaatacctcgaatattccacctccaaaccccaacgatcttccaccaccttattctgc 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tccaaatacctcgaatattccacctccaaaccccaacgatcttccaccaccttattctgc 189
Query: 575 agtcgtgggtaatcctcagtacggctttgtggtcccgggtggaccagtttcgcctgccga 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 agtcgtgggtaatcctcagtacggctttgtggtcccgggtggaccagtttcgcctgccga 249
Query: 635 tggtgtttacacacagcctaaacaatttactgctacgggagtgtaccctcaccctgtgac 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tggtgtttacacacagcctaaacaatttactgctacgggagtgtaccctcaccctgtgac 309
Query: 695 gactgctcagccccaacctggagatgttccaccgcctccgcctggtatgagcgtgcctat 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gactgctcagccccaacctggagatgttccaccgcctccgcctggtatgagcgtgcctat 369
Query: 755 tggggtggtgatgccgcccgcggttggcagcgagcccacaactgtaacctgttataattg 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tggggtggtgatgccgcccgcggttggcagcgagcccacaactgtaacctgttataattg 429
Query: 815 cggaaaagttgtaacaaccagagtcacgtacacaacagcctggcacacgcacctcgtagc 874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 cggaaaagttgtaacaaccagagtcacgtacacaacagcctggcacacgcacctcgtagc 489
Query: 875 tggatctatttgtgttataacaatggtttgttcactatgctgcctcggactggttccgta 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 490 tggatctatttgtgttataacaatggtttgttcactatgctgcctcggactggttccata 549
Query: 935 ctgtttcgatacattcaaagatgccgagcactactg 970
|||||||||||| |||||||||||||||||||||||
Sbjct: 550 ctgtttcgatacgttcaaagatgccgagcactactg 585
Score = 204 bits (103), Expect = 3e-52
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 972 atgtaataaatacacacatctttttcagattcataaattttatattgtaaaatttataaa 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 atgtaataaatacacacatctttttcagattcataaattttatattgtaaaatttataaa 751
Query: 1032 atgaacactaatttagcttgtttgaaaaagttccacatataga 1074
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 atgaacactaatttagcttgtttgaaaaagttccacatataga 794
>BF14_1202_C1
Length = 910
Score = 454 bits (229), Expect = e-127
Identities = 242/245 (98%), Gaps = 1/245 (0%)
Strand = Plus / Plus
Query: 1227 ttttttttacgatttgctatctgtaatcataattagtggtgcgtaccggcttaaaattgt 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 ttttttttacgatttgctatctgtaatcataattagtggtgcgtaccggcttaaaattgt 68
Query: 1287 atatattttttatactggcataatatggccagatttataattaaattctgctttcagtag 1346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 atatattttttatactggcataatatggccagatttataattaaattctgctttcagtag 128
Query: 1347 tatttgtattaatctatgaagttaaaaaagtttcaatggcccttgaatattttaattaaa 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 129 tatttgtattaatctatgaagttaaaaaagtttcaatggcccttgaatatttt-atttaa 187
Query: 1407 aaaaaaaaaatttaaacttccatttcaatctaagattatgtttgtaacagtctttaaata 1466
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 188 aaaaaaaaaatttaaacttccatttcaatctaagattatgtttgtaacagtctctaaata 247
Query: 1467 tttta 1471
|||||
Sbjct: 248 tttta 252
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 259,561
Number of extensions: 20115
Number of successful extensions: 20115
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 20114
Number of HSP's successfully gapped: 3
Length of query: 1471
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1454
Effective length of database: 8,119,229
Effective search space: 11805358966
Effective search space used: 11805358966
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)