BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18438 (UTR included)
(1981 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01059A1A08 1455 0.0
BF01013A2A06 563 e-160
>BF01059A1A08
Length = 837
Score = 1455 bits (734), Expect = 0.0
Identities = 758/766 (98%)
Strand = Plus / Plus
Query: 464 attcataatgaatattaaagcggcccttgccattggcatggtatttgtgggatgttgctc 523
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 attcataatgaatattagagcggcccttgccattggcatggtatttgtgggatgttgctc 131
Query: 524 caacgtggtgtttttggagctgctcgtgaaagaagatcccggtgctggtaatttggcgac 583
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 132 caacgtggtgtttttggagctgcttgtgaaagaagatcccggtgctggtaatttggcgac 191
Query: 584 gttcctccaattcctgtttatagccgccggcggattttgtaccgtcggcaaatttggtac 643
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 192 gttcctccaattcctgtttatagccgccggcggattttgtaccgtcggcaaattcggtac 251
Query: 644 agccaagaggcatataccattcaagaagtatctattactcgtcggattcttctggacgag 703
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 252 agccaagaggcatataccattcaagaagtatctattactcgtcggcttcttctggacgag 311
Query: 704 cagcgtagcgaataattatgcattcgatttcaatatatcgatgccactccacatgatatt 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cagcgtagcgaataattatgcattcgatttcaatatatcgatgccactccacatgatatt 371
Query: 764 ccgagctggctcactcatggccaacatggcgatgggtgtttggatattgaagaagcagta 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ccgagctggctcactcatggccaacatggcgatgggtgtttggatattgaagaagcagta 431
Query: 824 tccagttctgaagtacttagcgatcttcatgatatccgccggtatagctatatgcacgat 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tccagttctgaagtacttagcgatcttcatgatatccgccggtatagctatatgcacgat 491
Query: 884 acaatccagcggagaggtgaaggcgccgcgagagactcacgaggacgccgctgaggaaga 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 acaatccagcggagaggtgaaggcgccgcgagagactcacgaggacgccgctgaggaaga 551
Query: 944 aaagttaaagttcattgattggctgtggtggtgcctggggatagggattcttacgttcgc 1003
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 552 aaagttaaagttcattgattggctgtggtggtgcctggggatagggattctaacgttcgc 611
Query: 1004 attatttatatcagctcgtatgggaatattccaggagtccctatactccaagtacgggaa 1063
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 612 gttatttatatcagctcgtatgggaatattccaggagtccctatactccacgtacgggaa 671
Query: 1064 gcatccatgggaagcgttatactatgctcacttattgcctctagtcatatggttgcccac 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gcatccatgggaagcgttatactatgctcacttattgcctctagtcatatggttgcccac 731
Query: 1124 cgccccgaacctgataagccatatcaagttggccatggatactccactagtcgatttcct 1183
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 732 cgccccgaacctgataagccatatcaagttggctatggatactccactagtcgatttcct 791
Query: 1184 cggattctctttacccagacaagttctatggcttattttatacgtc 1229
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 cggattctctttacccagacaagttctatggcttattttatacgtc 837
Score = 141 bits (71), Expect = 5e-33
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 87 ggcttgtcataatgtgttttaaattgtgaatttagtatttatttaagattaatgtgaaaa 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcttgtcataatgtgttttaaattgtgaatttagtatttatttaagattaatgtgaaaa 60
Query: 147 gtgttgaaaac 157
|||||||||||
Sbjct: 61 gtgttgaaaac 71
>BF01013A2A06
Length = 777
Score = 563 bits (284), Expect = e-160
Identities = 321/332 (96%), Gaps = 1/332 (0%)
Strand = Plus / Plus
Query: 1651 tgttccgcgttctcattgaagtacattgttaatattaagataactaattagagcaagtat 1710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tgttccgcgttctcattgaagtacattgttaatattaagataactaattagagcaagtat 400
Query: 1711 ag-ctgtacttagaccgtgacttgcatttatcaagttaactatgaaggtcgtatataatt 1769
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gtactgtacttagaccgtgacttgcatttatcaagttaactatgaaggtcgtatataatt 460
Query: 1770 aatagatattataaatctataataaattttgactttaatggaggaaattcattattaata 1829
||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 461 catagataatataaatctacaataaattttgtctttaatggaggaaattcattattaata 520
Query: 1830 gataatttataaaaaaatactatctgttttaaatgtacaaatagatgcgcagttcttgtt 1889
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gataatttataaaaaaatatcatctgttttaaatgtacaaatagatgcgcagttcttgtt 580
Query: 1890 aagattagaatgaaaagcttcagataaaagcccgtttgaacattggcagacaaatgatgg 1949
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 aagattagaatgataagcttcagataaaagcccgtttgaacattggcagacaaatgatgg 640
Query: 1950 atcatggcgttaggtggtaataaaattaaaaa 1981
|||||||||||||||||| |||||||||||||
Sbjct: 641 atcatggcgttaggtggtcataaaattaaaaa 672
Score = 480 bits (242), Expect = e-135
Identities = 245/246 (99%)
Strand = Plus / Plus
Query: 1405 gaacaatgattttcactgagctattgcaaaagttcgtatacctatttatacctaaagata 1464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 gaacaatgattttcactgagctattgcaaaagttcgtatacctatttatacctaaagata 109
Query: 1465 agaaaaaggtgcagtaggaataatgaaatatttaattttatactaattaacattttcgag 1524
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 110 agaaaaaggtgcagtaggaataatgaaatagttaattttatactaattaacattttcgag 169
Query: 1525 aatataacacatttatacgaaatatattcagattcaacatattggaaataatatgtcgaa 1584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 aatataacacatttatacgaaatatattcagattcaacatattggaaataatatgtcgaa 229
Query: 1585 atatgaaaatcaattaccagaacaaactcgcattatgaatttatattaaactgaatgata 1644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 atatgaaaatcaattaccagaacaaactcgcattatgaatttatattaaactgaatgata 289
Query: 1645 taatta 1650
||||||
Sbjct: 290 taatta 295
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 244,416
Number of extensions: 5134
Number of successful extensions: 5134
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5133
Number of HSP's successfully gapped: 4
Length of query: 1981
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1964
Effective length of database: 8,119,229
Effective search space: 15946165756
Effective search space used: 15946165756
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)