BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18454 (UTR included)
(1630 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2536_C1 1610 0.0
>BF14_2536_C1
Length = 850
Score = 1610 bits (812), Expect = 0.0
Identities = 843/851 (99%), Gaps = 3/851 (0%)
Strand = Plus / Plus
Query: 391 aaaaacagcaacaaatctaataatataatagattaagaaatatttgtaattagtcatatc 450
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaaacaccaacaaatctaataatataatagattaagaaatatttgtaattagtcatatc 60
Query: 451 tgttaaaaaattgcgaaatattttaatgcaaatagtaactttcattaataatgaactttt 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgttaaaaaattgcgaaatattttaatgcaaatagtaactttcattaataatgaactttt 120
Query: 511 tcaaaaaggcaccaacagtgaaagaacagcaacgagaaaatgatcgtgaacttcggaaag 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcaaaaaggcaccaacagtgaaagaacagcaacgagaaaatgatcgtgaacttcggaaag 180
Query: 571 caggtagagatttggaacgtgataaaaatgcattggaaagagaagaaaagaagttggagt 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caggtagagatttggaacgtgataaaaatgcattggaaagagaagaaaagaagttggagt 240
Query: 631 tggaaataaaaaaaatggcgaaagaaggaaataacgaaggttgtaaaatacttgctaagc 690
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggaaataaaaaaaatggcaaaagaaggaaataacgaaggttgtaaaatacttgctaagc 300
Query: 691 aattagtacaaatgcgtaagcagaaaactcgtatgtatgcagctaacagtaagatatcca 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aattagtacaaatgcgtaagcagaaaactcgtatgtatgcagctaacagtaagatatcca 360
Query: 751 gtgtacaaattcacaataaagcaatgggtgcaaatatagctattgcaggtgcaatgggta 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtgtacaaattcacaataaagcaatgggtgcaaatatagctattgcaggtgcaatgggta 420
Query: 811 caacagccaagaccatgggcaacattaacaaaatattgaaccctgcacaaatatcgaaag 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 421 caacagccaagaccatgggcaacattaacaaaatattgaaccctgcacaaatatccaaag 480
Query: 871 acatggaagcattcaaagtggccagtgctaaaatggatatgactgatgaaatgatttcag 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acatggaagcattcaaagtggccagtgctaaaatggatatgactgatgaaatgatttcag 540
Query: 931 aaactttagatgacatcatgaccgagtctggggatgaagaggaaactgaaggtgttgtca 990
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaactttagatgacatcatgactgagtctggggatgaagaggaaactgaaggtgttgtca 600
Query: 991 accaagtccttgatgaaattggtattgaaataagtggaaagatggccaatgcaccttcag 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 accaagtccttgatgaaattggtattgaaataagtggaaagatggccaatgcaccttcag 660
Query: 1051 tttctcgcaacaaagttggtgaatccacatctgacattgacaaagaacttatggcgcagc 1110
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tttctcgcaacagagttggtgaatccacatctgacattgacaaagaacttatggcgcagc 720
Query: 1111 taacaaaactcaagtcatagatttgttgtatttaaaaaatatatatttaatattatacaa 1170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 taacaaaactcaagtcatagatttgttgtatttaaaaaatatatatttaatattatacaa 780
Query: 1171 aac--aaactgactattactaaaataaatctaacaaaatgttttttttttataaatgttt 1228
||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 781 aacataaactgactattactaaaataaatctaacaaaatg-tttttttttataaatgttt 839
Query: 1229 aatatttaaga 1239
|||||||||||
Sbjct: 840 aatatttaaga 850
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 316,838
Number of extensions: 8858
Number of successful extensions: 8858
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8856
Number of HSP's successfully gapped: 1
Length of query: 1630
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1613
Effective length of database: 8,119,229
Effective search space: 13096316377
Effective search space used: 13096316377
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)