BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18457 (UTR included)
(3784 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026B1B02 1445 0.0
BF01054A1D05 803 0.0
BF01018A2F04 672 0.0
>BF01026B1B02
Length = 749
Score = 1445 bits (729), Expect = 0.0
Identities = 735/737 (99%)
Strand = Plus / Plus
Query: 2205 gacgttttgtgcggattaaattatgaggttgttgtaaatggttacgctggttcttggact 2264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 gacgttttgtgcggattaaattatgaggttgttgtaaatggttacgctggttcttggact 72
Query: 2265 gcatggctggaagggaatcctaatggaccaagaatattacctgggatagagggttcaatt 2324
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 73 gcatggctggaagggaatcctaatggaccaagaatattacctggaatagagggttcaatt 132
Query: 2325 ctggaaccatctccttcagaactactggcgttgaattctggatcagcacatcttaatatt 2384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ctggaaccatctccttcagaactactggcgttgaattctggatcagcacatcttaatatt 192
Query: 2385 cgaacttccgacaacgatactgagtttctacgaacgcggttaccccagataagcgtgcca 2444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 cgaacttccgacaacgatactgagtttctacgaacgcggttaccccagataagcgtgcca 252
Query: 2445 ccttcatgtctaccagcagggtcgtattctgacaatgagttaaattccaactacgcacaa 2504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ccttcatgtctaccagcagggtcgtattctgacaatgagttaaattccaactacgcacaa 312
Query: 2505 acacatatgaattcgcctccaccagacaattcgttatctaacacagcttcttgttattat 2564
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 313 acacatatgaattcgcctccaccagacaattcgttatccaacacagcttcttgttattat 372
Query: 2565 gccggaaagtcctatgaagatgggtcacagtggatggctgcagagtcatgtcacatgtgt 2624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gccggaaagtcctatgaagatgggtcacagtggatggctgcagagtcatgtcacatgtgt 432
Query: 2625 gggtgtgttcatggcgcgctgcgttgtgacgcggtccgctgtcccccggtcacctgtgct 2684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gggtgtgttcatggcgcgctgcgttgtgacgcggtccgctgtcccccggtcacctgtgct 492
Query: 2685 gttcccactctgcgtcctccaggacaatgttgtccaatttgcaccaactcaactaaagcc 2744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gttcccactctgcgtcctccaggacaatgttgtccaatttgcaccaactcaactaaagcc 552
Query: 2745 gtatggaatgagtcccatggttgtcaccttgctggacagtaccacgcacccggttcctcc 2804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gtatggaatgagtcccatggttgtcaccttgctggacagtaccacgcacccggttcctcc 612
Query: 2805 tggcatccttacttagtacctggaggttacgacacttgtgcgatatgtacgtgtgagttc 2864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tggcatccttacttagtacctggaggttacgacacttgtgcgatatgtacgtgtgagttc 672
Query: 2865 gcaacacgacaagtacgctgtccacgtgttcgatgtccgcctttgaaatgtgctgagaag 2924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 gcaacacgacaagtacgctgtccacgtgttcgatgtccgcctttgaaatgtgctgagaag 732
Query: 2925 gatgcctaccgacccga 2941
|||||||||||||||||
Sbjct: 733 gatgcctaccgacccga 749
>BF01054A1D05
Length = 524
Score = 803 bits (405), Expect = 0.0
Identities = 408/409 (99%)
Strand = Plus / Plus
Query: 3376 ttgtattcgaattacgaatgtctcagccgcgtctacttcccaccggtattataattggta 3435
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 12 ttgtattcgaattacgaatgtctcagccgcgtcttcttcccaccggtattataattggta 71
Query: 3436 ttatccaggaacgtttcggtttgcgcggtcacagtgccatattatgatgtaaataataaa 3495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 ttatccaggaacgtttcggtttgcgcggtcacagtgccatattatgatgtaaataataaa 131
Query: 3496 ttatttttacctatatttatttagtagcgatcgtgtcgattgtccatcacaatatatgta 3555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ttatttttacctatatttatttagtagcgatcgtgtcgattgtccatcacaatatatgta 191
Query: 3556 ttgatcgtctcttgtgcatttgcttgtagtttttatttaccacttgtacatgctttacat 3615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ttgatcgtctcttgtgcatttgcttgtagtttttatttaccacttgtacatgctttacat 251
Query: 3616 gtaacgtgtttaacggtatatcttaccgtatttaatcagcctgtgttaactttattataa 3675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gtaacgtgtttaacggtatatcttaccgtatttaatcagcctgtgttaactttattataa 311
Query: 3676 gtaaacataagtatgttttaagttcgatttaatcgtgcgattgtcggccagaacaggttt 3735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gtaaacataagtatgttttaagttcgatttaatcgtgcgattgtcggccagaacaggttt 371
Query: 3736 tgtaaataccttttatattgctcttcttatatataatattacaataaaa 3784
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgtaaataccttttatattgctcttcttatatataatattacaataaaa 420
>BF01018A2F04
Length = 716
Score = 672 bits (339), Expect = 0.0
Identities = 339/339 (100%)
Strand = Plus / Plus
Query: 3446 acgtttcggtttgcgcggtcacagtgccatattatgatgtaaataataaattatttttac 3505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acgtttcggtttgcgcggtcacagtgccatattatgatgtaaataataaattatttttac 60
Query: 3506 ctatatttatttagtagcgatcgtgtcgattgtccatcacaatatatgtattgatcgtct 3565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctatatttatttagtagcgatcgtgtcgattgtccatcacaatatatgtattgatcgtct 120
Query: 3566 cttgtgcatttgcttgtagtttttatttaccacttgtacatgctttacatgtaacgtgtt 3625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttgtgcatttgcttgtagtttttatttaccacttgtacatgctttacatgtaacgtgtt 180
Query: 3626 taacggtatatcttaccgtatttaatcagcctgtgttaactttattataagtaaacataa 3685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taacggtatatcttaccgtatttaatcagcctgtgttaactttattataagtaaacataa 240
Query: 3686 gtatgttttaagttcgatttaatcgtgcgattgtcggccagaacaggttttgtaaatacc 3745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtatgttttaagttcgatttaatcgtgcgattgtcggccagaacaggttttgtaaatacc 300
Query: 3746 ttttatattgctcttcttatatataatattacaataaaa 3784
|||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttttatattgctcttcttatatataatattacaataaaa 339
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 303,269
Number of extensions: 4778
Number of successful extensions: 4778
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4778
Number of HSP's successfully gapped: 3
Length of query: 3784
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3766
Effective length of database: 8,109,745
Effective search space: 30541299670
Effective search space used: 30541299670
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)