BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18459 (UTR included)
(2266 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1820_C1 321 3e-87
>BF14_1820_C1
Length = 790
Score = 321 bits (162), Expect = 3e-87
Identities = 177/182 (97%)
Strand = Plus / Minus
Query: 1464 gctgtgaaagttttaaaagtcgggggtaagcttgtatacagtacatgtacagttactgta 1523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gctgtgaaagttttaaaagtcgggggtaagcttgtatacagtacatgtacagttactgta 392
Query: 1524 gaggaaaatgaaggaatggtgagctgggtattggataaatattcttgtatggaactcatt 1583
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 391 gaggaaaatgaaggtatggtgagctgggtattggataaatatccttgtatggaactcatt 332
Query: 1584 cccgctgaaccactacacggtgggccgggacaaccgaatgtaggtctgaatgatcaacaa 1643
||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 331 cccgctgaacctctacatggtgggccgggacaaccgaatgtaggtctgaacgatcaacaa 272
Query: 1644 ag 1645
||
Sbjct: 271 ag 270
Score = 313 bits (158), Expect = 7e-85
Identities = 183/191 (95%), Gaps = 4/191 (2%)
Strand = Plus / Minus
Query: 1644 agagtgatggtacagcgattcggtccagataacgatccactcagaccggtggaagatttg 1703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 agagtgatggtacagcgattcggtccagataacgatccactcagaccggtggaagatttg 132
Query: 1704 tacaggaatactataggtttctttatagcagccttcacaaaaaatgatgagcattgcgca 1763
||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||
Sbjct: 131 tacaggaatactataggtttctttatagcagccttcacaaaaaataatgagcactgcaca 72
Query: 1764 tgaaactatatataataaatatctatgaatac----atgtgttatatcttatccactctg 1819
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 71 tgaaactatatataataaatatctatgaatacatgtatgtgttatatcttatccactctg 12
Query: 1820 acccatagacc 1830
||||| |||||
Sbjct: 11 acccacagacc 1
Score = 228 bits (115), Expect = 3e-59
Identities = 131/138 (94%)
Strand = Plus / Minus
Query: 1325 atacaaatcaaacacttttgataaagtgctattggacgctccttgcagtggcttgggaca 1384
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 790 atacaaatcaaacacttttgataaagtgctattggacgctccttgcagtggtttgggaca 731
Query: 1385 acggcctctcttgaacaataaaatgactgccaaaatgcttcaatcctataagtttgtgca 1444
|||| ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 730 acggnnnnncttgaacaataaaatgactaccaaaatgcttcaatcctataagtttgtgca 671
Query: 1445 aagaaagctttttgattc 1462
||||||||||||||||||
Sbjct: 670 aagaaagctttttgattc 653
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 339,494
Number of extensions: 12703
Number of successful extensions: 12703
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 12701
Number of HSP's successfully gapped: 3
Length of query: 2266
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2249
Effective length of database: 8,119,229
Effective search space: 18260146021
Effective search space used: 18260146021
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)