BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18468 (UTR included)
(2668 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042A1B11 1221 0.0
>BF01042A1B11
Length = 674
Score = 1221 bits (616), Expect = 0.0
Identities = 663/676 (98%), Gaps = 2/676 (0%)
Strand = Plus / Plus
Query: 1777 atcccgaacctagtacaagccagctcagtagagtctccgtcgaggaactgttggaacaat 1836
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcctgaacctagtacaagccagctcagtagagtctccgtcgaggaactgttggaacaat 60
Query: 1837 tgcagataacgcagaccgagctcgaaaatgtcagagattcggcattcacagcggacagaa 1896
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 61 tgcagataacgcagaccgagctcgaaaatgtcagagattcagcattcacagcggacagaa 120
Query: 1897 cggcaaagtcacaagtacttcttagtgcaaaggaggctgtttctttatgggtcctaggag 1956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cggcaaagtcacaagtacttcttagtgcaaaggaggctgtttctttatgggtcctaggag 180
Query: 1957 ctcgaaaggcaatgtatcgacgtattgtggagtcccagaaaggaaacaagaccatcattg 2016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctcgaaaggcaatgtatcgacgtattgtggagtcccagaaaggaaacaagaccatcattg 240
Query: 2017 atccggaagtgaccttgcagttcctgaaatcggcgatctactacttcctgacggatcccg 2076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atccggaagtgaccttgcagttcctgaaatcggcgatctactacttcctgacggatcccg 300
Query: 2077 aaaaccatcaaggtcacctgaatgccatcgaaaacatcctagggttcaccgaagctgaaa 2136
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 301 aaaaccatcagggtcacctgaatgccatcgaaaacatcctaggcttcaccgaagctgaaa 360
Query: 2137 agaaaaatatacgcaaagcgagaacgacgtaggctgctacaaatatgtgatagtaatagt 2196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agaaaaatatacgcaaagcgagaacgacgtaggctgctacaaatatgtgatagtaatagt 420
Query: 2197 tacatgccacttagatataaatacttgttgcatgtccacaaagactagttgtttaaaaca 2256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacatgccacttagatataaatacttgttgcatgtccacaaagactagttgtttaaaaca 480
Query: 2257 aaacagatgcgcatcgttttaagttgttcataatacttttaccataataattattattat 2316
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 481 aaacagatgcacatcgttttaagttgttcatgatacttttaccataataattattattat 540
Query: 2317 cttgcacttccgaactgtttaatcagtttgtttatgtcttatttctgcaagttatctatc 2376
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 541 cttgcacttccgaactgttt-atcagtttgtttatgtcttatttctgcaagttatccatc 599
Query: 2377 gaattttttttagacattaaatttgtgattattttttttaatagttcttaagcgccaaag 2436
||| |||| ||||| ||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 600 gaa-ttttgttagatattaaatttgtgattattttttttactagtttttaagcgccaaag 658
Query: 2437 aaaagcattccttatc 2452
||||||||||||||||
Sbjct: 659 aaaagcattccttatc 674
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 350,738
Number of extensions: 7351
Number of successful extensions: 7351
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7349
Number of HSP's successfully gapped: 1
Length of query: 2668
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2651
Effective length of database: 8,119,229
Effective search space: 21524076079
Effective search space used: 21524076079
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)