BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18470 (UTR included)
(1438 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01011B1D07 392 e-109
>BF01011B1D07
Length = 623
Score = 392 bits (198), Expect = e-109
Identities = 246/264 (93%), Gaps = 2/264 (0%)
Strand = Plus / Plus
Query: 89 tattcgaggagtacgttgggctattattatttattattaacattctatattacaagtaaa 148
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 187 tattcgaggagtacgttgggctattattatttattattaacattatatattacaagtaaa 246
Query: 149 gtaaatcttgaagaaagggaatttacagatgccactggccatggtatcaaaagttttatt 208
||||| || |||||||||||||||||||| ||||||| ||||||| || |||
Sbjct: 247 gtaaaactnnnnnnaagggaatttacagatgccattggccattgtatcaa--gtnnnatt 304
Query: 209 gtttataacgtaacatcttataataaaatctgagaaataagtaaagttacgtagattttt 268
|||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 305 gtttataacgtaacatcttatattaaaatctgagaaataagtgaagttacgtagattttt 364
Query: 269 aactttattttattaatcataatgtttctttactaaataatatatacctttccttgtaaa 328
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 365 aactttattttattaatcataatgtttctttactaaataatatataccttaccttgtaaa 424
Query: 329 ccattggtttggagtagcgtgaat 352
||||||||||||||||||||||||
Sbjct: 425 ccattggtttggagtagcgtgaat 448
Score = 289 bits (146), Expect = 6e-78
Identities = 167/175 (95%)
Strand = Plus / Plus
Query: 443 acaacaattaatttttggcaaagaaaaaagagcacttaacaaagaggatttaatacaaat 502
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 449 acaacaattaatttttggcaaagaagaaagagcacttgacaaagaggatttaatacaaat 508
Query: 503 gcaatacttggagagagtcatcaaagaaagcatgcgactctacactgtggtgccaattat 562
|| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 509 gctatacttgaagagagtcatcaaagnnngcatgcgactctacactgtggtgccaattat 568
Query: 563 agctagaaatattgaccgagatatatatttaccgtacagtaaagtgacaatacca 617
||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 agcgagaaatattgaccgagatatatatttaccgtacagtaaagtgacaatacca 623
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 231,625
Number of extensions: 5576
Number of successful extensions: 5576
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5574
Number of HSP's successfully gapped: 2
Length of query: 1438
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1421
Effective length of database: 8,119,229
Effective search space: 11537424409
Effective search space used: 11537424409
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)