BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18474 (UTR included)
(1936 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01046B2B05 1235 0.0
>BF01046B2B05
Length = 751
Score = 1235 bits (623), Expect = 0.0
Identities = 641/647 (99%)
Strand = Plus / Plus
Query: 490 aagtttcagttatggatcgtctcttacggcttggaggaggtatggcgggcctctcacaag 549
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 105 aagtttcagttatggatcgtctcttacgacttggaggaggtatggcgggcctctcacaag 164
Query: 550 cgccgccgccgagtgatgcccctgcagtcgatacagctgaacaagtctatatatcctcat 609
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 165 cgccgccgccgagtgatgcccctgcagtcgatacagctgaacaagtctatatttcctcat 224
Query: 610 tagctttattaaagatgttaaaacacggtcgtgccggagtgcctatggaagttatgggtc 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tagctttattaaagatgttaaaacacggtcgtgccggagtgcctatggaagttatgggtc 284
Query: 670 tcatgttaggagaatttgttgatgactacaccgttcgtgttattgacgtatttgcgatgc 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tcatgttaggagaatttgttgatgactacaccgttcgtgttattgacgtatttgcgatgc 344
Query: 730 cacaaactggtactggtgtttctgtagaagctgttgatcctgtgtttcaagcaaaaatgt 789
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 345 cacaaactggtactggtgtttctgtagaagctgttgatcctgtgtttcaagctaaaatgt 404
Query: 790 tggatatgttaaaacaaacaggccgtccagaaatggtagtgggatggtatcattcccatc 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tggatatgttaaaacaaacaggccgtccagaaatggtagtgggatggtatcattcccatc 464
Query: 850 ctggctttggctgttggttatctggtgtggatattaacactcagcagtcatttgaggcat 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ctggctttggctgttggttatctggtgtggatattaacactcagcagtcatttgaggcat 524
Query: 910 tatcagaacgtgctgtggccgttgtcgttgacccaattcagtctgtgaaaggtaaagtgg 969
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 525 tatcagaacgtgctgtggccgttgtcgttgacccaattcagtctgtgaaaggcaaagtgg 584
Query: 970 tcattgatgcattccgcctcatcaatccaaatatgatggtcctgggacaggagccgagac 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tcattgatgcattccgcctcatcaatccaaatatgatggtcctgggacaggagccgagac 644
Query: 1030 aaacaacttccaatttggggcacttacaaaaaccatcagtgcaagcattgatacatggtc 1089
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 645 aaacaacttccaatttggggcacttacaaaaaccatcagtccaagcattgatacatggtc 704
Query: 1090 tcaaccgtcactattactctataagcatcaactacagaaaaaatgaa 1136
||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 705 tcaaccgtcactattactctataagcatcaattacagaaaaaatgaa 751
Score = 149 bits (75), Expect = 2e-35
Identities = 93/97 (95%), Gaps = 2/97 (2%)
Strand = Plus / Plus
Query: 317 atccttgtttaaaattgtgataatcctgtagctttaacactgattca-tacagtttttat 375
||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 12 atccttgtttaaa-ttgtgataatcctgtagctttaacactgattnnntacagtttttat 70
Query: 376 aataaacttgagtatttgacagcaaaaaacccacaag 412
|||||||||||||||||||||||||||||||||||||
Sbjct: 71 aataaacttgagtatttgacagcaaaaaacccacaag 107
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 270,948
Number of extensions: 5992
Number of successful extensions: 5992
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5990
Number of HSP's successfully gapped: 2
Length of query: 1936
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1919
Effective length of database: 8,119,229
Effective search space: 15580800451
Effective search space used: 15580800451
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)