BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18481 (UTR included)
(3457 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01036X1F07 230 1e-59
>BF01036X1F07
Length = 790
Score = 230 bits (116), Expect = 1e-59
Identities = 119/120 (99%)
Strand = Plus / Plus
Query: 3338 atgaagacctctatataaatcggctattatttaaaatttcttgtgaaatcacacagttta 3397
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgaagacttctatataaatcggctattatttaaaatttcttgtgaaatcacacagttta 60
Query: 3398 ttttgaagaagttaattttttatttattaaaccgatattgatttacatttgctggcacat 3457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttgaagaagttaattttttatttattaaaccgatattgatttacatttgctggcacat 120
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 456,388
Number of extensions: 9876
Number of successful extensions: 9876
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9876
Number of HSP's successfully gapped: 1
Length of query: 3457
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3439
Effective length of database: 8,109,745
Effective search space: 27889413055
Effective search space used: 27889413055
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)