BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18501 (UTR included)
(2263 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1479_C1 2052 0.0
BF01037B2F03 525 e-149
BF01024A2B03 88 7e-17
>BF14_1479_C1
Length = 1180
Score = 2052 bits (1035), Expect = 0.0
Identities = 1077/1091 (98%)
Strand = Plus / Plus
Query: 1173 ttcccgtccggcaagaaggataatgctgaagaatacaatggaggcagaacttccagtgac 1232
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2 ttcccgtccggcaagaaggataatgctgaagaatacaacggaggcagaacttccagtgac 61
Query: 1233 attgtgtcatgggcgcttgagaaactcgctgagaatattgcaccaccagaagttgtacag 1292
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 62 attgtgtcatgggcgcttgagaaactcgctgaaaatattgcaccaccagaagttgtacag 121
Query: 1293 gtcattgacccagccaccatgagtgaatgtagcgagaagcctctatgtgtggtgtcagta 1352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gtcattgacccagccaccatgagtgaatgtagcgagaagcctctatgtgtggtgtcagta 181
Query: 1353 ctacctcatatattggactgtgacgccgcctgcaggaactcatacatcgatatcctcaga 1412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ctacctcatatattggactgtgacgccgcctgcaggaactcatacatcgatatcctcaga 241
Query: 1413 agactcggagagaaatacaagaacaaaatgtggggatgggtgtggactgaagcgggagct 1472
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 242 agactcggagagaaatacaagaacaaaatgtggggatgggtgtggacggaagcgggagct 301
Query: 1473 cagtcgtcactggaagatgctcttgaaataggaggctttggctaccccgccatggctgta 1532
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cagtcgtcacttgaagatgctcttgaaataggaggctttggctaccccgccatggctgta 361
Query: 1533 gttaacgctaagaaactgaagttcagtacactgcgagggtccttctctgagacaggaatc 1592
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 362 gttaacgctaagaaactgaagttcagtacactacgagggtccttctctgagacaggaatc 421
Query: 1593 aacgagttccttagggacctatcgtttggccgaggtcaaaccgctccagtccgaggtgca 1652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aacgagttccttagggacctatcgtttggccgaggtcaaaccgctccagtccgaggtgca 481
Query: 1653 gaaatgccaaaaattgttacacaggatccttgggatggtaaagacggtgaattacccccg 1712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gaaatgccaaaaattgttacacaggatccttgggatggtaaagacggtgaattacccccg 541
Query: 1713 gaagaggacatcgacctctcagatatagatctcgagaaagatgaattgtaaatgactgat 1772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gaagaggacatcgacctctcagatatagatctcgagaaagatgaattgtaaatgactgat 601
Query: 1773 ttagaattaaatgtaaattctcagtgtaatttgctttttcataatggtaacgttagttta 1832
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 602 ttagaattaaatgtaaattctcagtgtaatttgctttttaataatggtaacattagttta 661
Query: 1833 ctgcgcaggaagtgtgatgtggacatacaagttgggtgtaaaattatgaatagcgctcta 1892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ctgcgcaggaagtgtgatgtggacatacaagttgggtgtaaaattatgaatagcgctcta 721
Query: 1893 aaatttgaatgctttgtatttttagtgatgaaacttcgttaacatattaatagatctttt 1952
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 722 aaatttgaatgctttgtgtttttagtgatgaaacttcattaacatattaatagatctttt 781
Query: 1953 tttttcgtgtcagtgttgtaagactttaatatttcatacttaaacctatatactaatatg 2012
|||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 782 tttttcgtgtcaatgttgtaagactttaacatttcatacttaaacctatatactaatatg 841
Query: 2013 atattcattatacaaaagtaaaacatagggtttttaaattttattatatacttagtcttt 2072
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 842 atattcattatacaaaagtaaaagatagggtttttaaattttattatatacttagtcttt 901
Query: 2073 gtaataagaaaagttttttgaaatttatatttatcagtttcagttttgctttgagatgtt 2132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 gtaataagaaaagttttttgaaatttatatttatcagtttcagttttgctttgagatgtt 961
Query: 2133 tattataacttataattaataattaaagtacataatatgggggactatacacaaatgtta 2192
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 962 tattataacttataattaataattaaagtacataatatggaggactatacacaaatgtta 1021
Query: 2193 agcaaatccataaaaatatctcgccagcatatcttccatgtttaagcatttactgtcgcc 2252
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1022 agcaaatccataaaaatatctcgccagcatatcttccatgtttaaacatttactgtcgcc 1081
Query: 2253 aaaattaaaag 2263
|||||||||||
Sbjct: 1082 aaaattaaaag 1092
>BF01037B2F03
Length = 277
Score = 525 bits (265), Expect = e-149
Identities = 273/276 (98%)
Strand = Plus / Plus
Query: 857 ctttgttgatgccgctctgaaggcggccaaggacaaggcatatgacagcctcggcaagaa 916
||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 1 ctttgttgatgccgctctgaaggcggccaagnacaaggcatatgacagccttggcaagaa 60
Query: 917 agcgaagagttctgataagtctgacgtcataaccttgacggatgaaaacttcaataagtt 976
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agcaaagagttctgataagtctgacgtcataaccttgacggatgaaaacttcaataagtt 120
Query: 977 ggttttggagagcgatgacatgtggctcgttgagttcttcgccccttggtgtggacactg 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggttttggagagcgatgacatgtggctcgttgagttcttcgccccttggtgtggacactg 180
Query: 1037 caagaatctcgaacctcactgggctaaggctgccactgaactaaagggcaagatcaaact 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caagaatctcgaacctcactgggctaaggctgccactgaactaaagggcaagatcaaact 240
Query: 1097 gggtgcagtggacgcgacagtacaccaggtgttggc 1132
||||||||||||||||||||||||||||||||||||
Sbjct: 241 gggtgcagtggacgcgacagtacaccaggtgttggc 276
>BF01024A2B03
Length = 724
Score = 87.7 bits (44), Expect = 7e-17
Identities = 89/103 (86%), Gaps = 2/103 (1%)
Strand = Plus / Minus
Query: 67 aatcgtcgaatattttgtcaatgtta--gttttcatttgttggacgaattataatctgga 124
|||||| |||||||||| |||||| | ||||| |||||| ||||||||||||||| ||
Sbjct: 302 aatcgttgaatattttgccaatgtcaacgtttttatttgtaggacgaattataatcccga 243
Query: 125 gtactgtggggagaaaacacgaaggagtttgtcgaatggaata 167
||||||| |||| ||||||||| ||||||||||||| |||||
Sbjct: 242 gtactgtttggaggaaacacgaacgagtttgtcgaattgaata 200
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 288,505
Number of extensions: 6333
Number of successful extensions: 6333
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 6333
Number of HSP's successfully gapped: 3
Length of query: 2263
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2246
Effective length of database: 8,119,229
Effective search space: 18235788334
Effective search space used: 18235788334
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)