BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18502 (UTR included)
(1504 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_817_C1 1431 0.0
>BF14_817_C1
Length = 1189
Score = 1431 bits (722), Expect = 0.0
Identities = 750/758 (98%), Gaps = 1/758 (0%)
Strand = Plus / Plus
Query: 1 cattgttaccacacccaacagcaataactcagcaagaagaccaacttgtcaaatacaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 cattgttaccacacccaacagcaataactcagcaagaagaccaacttgtcaaatacaaca 491
Query: 61 gtaatttgtacttttattcaccatataaagtgttaacacagaaaacaacagtcgtattaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gtaatttgtacttttattcaccatataaagtgttaacacagaaaacaacagtcgtattaa 551
Query: 121 atactaaatcagttgaatcattcacaaaagttaagcctttctcccaacaagatggcaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 atactaaatcagttgaatcattcacaaaagttaagcctttctcccaacaagatggcaata 611
Query: 181 ttaactatggtccatactcaaacattgagccatttacagagaaagaacttagtctccatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 ttaactatggtccatactcaaacattgagccatttacagagaaagaacttagtctccatt 671
Query: 241 ataagaataactccccgttccttactgtgactcgtttggagcgacttattgaagtatctc 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ataagaataactccccattccttactgtgactcgtttggagcgacttattgaagtatctc 731
Query: 301 attggggtaacattgctattgaagaaatcattgaaattgaacatagtggggcaaagttga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 attggggtaacattgctattgaagaaatcattgaaattgaacatagtggggcaaagttga 791
Query: 361 aaggcccattttcaaggtatgactatcaacaggaccaccacagtggacccgcaagtgtaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 aaggcccattttcaaggtatgactatcaacaggaccaccacagtggacccgcaagtgtaa 851
Query: 421 ggtcttacaagactctactgccagcatcagcctctgatgtttattaccgagacactaatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 ggtcttacaagactctactgccagcatcagcctctgatgtttattaccgagacactaatg 911
Query: 481 gtaacatctcaacatccaacatgaaagtaaagaaagattcagttgaattggacttaaggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912 gtaacatctcaacatccaacatgaaagtaaagaaagattcagttgaattggacttaaggc 971
Query: 541 ccagatacccactgtttggtggttggaggtcacactacacattaggctacaatgtcccta 600
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 972 ccagatacccactgtttggtggttggaggtcccactacacattaggctacaatgtcccca 1031
Query: 601 gctacgaatacctgtaccactctggaaatgaatatttacttaagatgagagcggtggatc 660
||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 1032 gctacgaatacctctaccactctggaaacgaatatttactaaagatgagagcggtggatc 1091
Query: 661 atgtttttgatgatatgcaaatagatgaacttgtcacaaaaattatattacccgaa-ggc 719
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1092 atgtttttgatgatatgcaaatagatgaacttgtcacaaaaattatattacccgaanggc 1151
Query: 720 tcaacaagtattaaaattaatttcccatttgctgtcac 757
||||||||||||||||||||||||||||| ||||||||
Sbjct: 1152 tcaacaagtattaaaattaatttcccattcgctgtcac 1189
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 223,871
Number of extensions: 4873
Number of successful extensions: 4873
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4872
Number of HSP's successfully gapped: 1
Length of query: 1504
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1487
Effective length of database: 8,119,229
Effective search space: 12073293523
Effective search space used: 12073293523
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)