BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18505 (UTR included)
(2404 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01058B2C12 874 0.0
BF01029B1G09 141 6e-33
>BF01058B2C12
Length = 801
Score = 874 bits (441), Expect = 0.0
Identities = 471/482 (97%)
Strand = Plus / Plus
Query: 1336 acaacaccatagatggtataatcgctggcttctaccgagtcgccgctggtaaaatcggtg 1395
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 acaacactatagatggtataatcgctggcttctaccgagtcgccgctggtaaaatcggta 379
Query: 1396 cctgtgtggcgcaaatagagaaacgtcagaaaacaggcatgccatacgaggacgcctgga 1455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cctgtgtggcgcaaatagagaaacgtcagaaaacaggcatgccatacgaggacgcctgga 439
Query: 1456 atatgacatccgttcaactgacttcagcatcggaggcccactgtcgtgcgataatcttgt 1515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atatgacatccgttcaactgacttcagcatcggaggcccactgtcgtgcgataatcttgt 499
Query: 1516 caacgtactacaaggagatcgagcgtcagagtaactcggtttcccccgagctgtcgacag 1575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 caacgtactacaaggagatcgagcgtcagagtaactcggtttcccccgagctgtcgacag 559
Query: 1576 tgctacggcagttggtagacctgtatgtggtgtattgggcgctgcagtgcattggagacc 1635
||||||||||| |||| |||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 560 tgctacggcagctggtcgacctgtacgtggtgtactgggcgctgcagtgcattggagacc 619
Query: 1636 tactcaggttcacatcgatctctgagcgtgacatcgaccaacttcaggcctggtacgagg 1695
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 620 tactcaggttcacatcgatctctgagcgtgacatcgaccagcttcaggcctggtacgagg 679
Query: 1696 atctcctcaccaggcttaggccgaacgcggtgggactcgtggacgccttcgacattaggg 1755
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 atctcctcaccaggcttnnnccgaacgcggtgggactcgtggacgccttcgacattaggg 739
Query: 1756 acgagatcctcaactctgcgctgggtgcatacgatggcaatgcctacgaacgtcttatgg 1815
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 740 acgagatcctcaactctgcgctgggtgcatacgatggtaatgcctacgaacgtcttatgg 799
Query: 1816 cg 1817
||
Sbjct: 800 cg 801
Score = 636 bits (321), Expect = 0.0
Identities = 324/325 (99%)
Strand = Plus / Plus
Query: 669 agaatacccagagactatatgctaatgaagaacgctaaagttttagaggacggtacatac 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaatacccagagactatatgctaatgaagaacgctaaagttttagaggacggtacatac 60
Query: 729 gtgactgcaccaagctcgaagctcgcgtacggcaccatgatgttcgtgcgagtgatgttg 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgactgcaccaagctcgaagctcgcgtacggcaccatgatgttcgtgcgagtgatgttg 120
Query: 789 gtcaacgacatgtgtaactacatggctaaagcggtcaccatagccaccagatacagcgct 848
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 121 gtcaacgacatgtgtaactacatggctaaagcggtcaccatagcaaccagatacagcgct 180
Query: 849 gtgaggagacagtcgcagcctaaacccaatgaaccggaaccccagatcttggattacgtg 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtgaggagacagtcgcagcctaaacccaatgaaccggaaccccagatcttggattacgtg 240
Query: 909 acgcagcagcacaagttgatgataggtctagcgtcggtccacgccttcagaacatgcgct 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acgcagcagcacaagttgatgataggtctagcgtcggtccacgccttcagaacatgcgct 300
Query: 969 gattggctctggcagatgtacaaca 993
|||||||||||||||||||||||||
Sbjct: 301 gattggctctggcagatgtacaaca 325
>BF01029B1G09
Length = 784
Score = 141 bits (71), Expect = 6e-33
Identities = 136/154 (88%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 205 tttttttaaataatattcgatacaaattcactattaattcattaaattgacacaaaact- 263
||||||||||||||||||||||||| ||||||| ||||| |||||| | ||||||||||
Sbjct: 387 tttttttaaataatattcgatacaatttcactaataatttattaaa-taacacaaaacta 445
Query: 264 aataacaattctaaattaattactttcaactatctcgatttagacttatcgtgaaaggaa 323
|| ||||||| ||| ||||| ||||||||| |||||||||| ||||||| ||| | |||
Sbjct: 446 aaaaacaattttaatttaataactttcaaccgtctcgatttaaacttatcttgagatgaa 505
Query: 324 atctgaatataacacaaacgaaagatttaaacac 357
|||||| ||||||||||||||||||||||||||
Sbjct: 506 atctga--ataacacaaacgaaagatttaaacac 537
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 271,589
Number of extensions: 5073
Number of successful extensions: 5073
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5070
Number of HSP's successfully gapped: 3
Length of query: 2404
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2387
Effective length of database: 8,119,229
Effective search space: 19380599623
Effective search space used: 19380599623
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)