BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18534 (UTR included)
(3802 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01034A1A12 1310 0.0
>BF01034A1A12
Length = 690
Score = 1310 bits (661), Expect = 0.0
Identities = 682/690 (98%)
Strand = Plus / Plus
Query: 2162 gggcacggcgggcggtggtcactacacgtgcgtcgcccgcgtcgacgacaggtggtactc 2221
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 gggcacggcgggcggtggtcactacacgtgcgtcnnncgcgtcgacgacaggtggtactc 60
Query: 2222 gttcgacgacgcgtccgtgacgccgctcaccacccaccacctagcatcctgcgaggccta 2281
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttcgacgacgcggccgtgacgccgctcaccacccaccacctagcatcctgcgaggccta 120
Query: 2282 cgtactgttctacagaaaaataaatccacaaatggcaaccctgagacaaaaggcggccga 2341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgtactgttctacagaaaaataaatccacaaatggcaaccctgagacaaaaggcggccga 180
Query: 2342 aatattagaatcgtccaactcggaaccgaacgacattaagttttacatctccaagcagtg 2401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatattagaatcgtccaactcggaaccgaacgacattaagttttacatctccaagcagtg 240
Query: 2402 gattaataaattcaacacgtgggcggagcctgggcccatagacaatagtgacttcgtgtg 2461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gattaataaattcaacacgtgggcggagcctgggcccatagacaatagtgacttcgtgtg 300
Query: 2462 cgtccacggcggggttcgtcctgagcgggcgcctcatctgccagccctggctgcccgtct 2521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgtccacggcggggttcgtcctgagcgggcgcctcatctgccagccctggctgcccgtct 360
Query: 2522 cccgcaaccactatgggacttcctctaccatcagttcggcggtggaccggcggtgtctca 2581
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 361 cccgcaaccactatgggacttcctctaccatcaattcggcggtggaccggcggtgtctca 420
Query: 2582 cgcccacgagtgtggagtgtgtgcgcgagctcagcatagactcagggcgaggagagccag 2641
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 421 cgcccacgagtgtggagtgtgtgcgcgagctcaggataggctcagggcgaggagagccag 480
Query: 2642 ggaactcacagccttcgctgaactacacgccatgttccaggaccaggagcgccctctagc 2701
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggaactcgcagccttcgctgaactacacgccatgttccaggaccaggagcgccctctagc 540
Query: 2702 ggtgttcgctatcagtatggcgtggttcagacagtggcaggcgttcgtccgggacaaggc 2761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggtgttcgctatcagtatggcgtggttcagacagtggcaggcgttcgtccgggacaaggc 600
Query: 2762 gagacacccgccgccacccgtcgacaacacgtccatcgttgttaaacaggaaatcgaggg 2821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gagacacccgccgccacccgtcgacaacacgtccatcgttgttaaacaggaaatcgaggg 660
Query: 2822 gatcgtgtcatatgtactgaagccgggttc 2851
||||||||||||||||||||||||||||||
Sbjct: 661 gatcgtgtcatatgtactgaagccgggttc 690
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 434,565
Number of extensions: 10870
Number of successful extensions: 10870
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10870
Number of HSP's successfully gapped: 1
Length of query: 3802
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3784
Effective length of database: 8,109,745
Effective search space: 30687275080
Effective search space used: 30687275080
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)