BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18535 (UTR included)
(1441 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2161_C1 1824 0.0
>BF14_2161_C1
Length = 1041
Score = 1824 bits (920), Expect = 0.0
Identities = 939/944 (99%), Gaps = 1/944 (0%)
Strand = Plus / Plus
Query: 499 agatgtctgaacagaatgttgggtcggtgcctgcttcagcggcttcatctggcaccaacg 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agatgtctgaacagaatgttgggtcggtgcctgcttcagcggcttcatctggcaccaacg 120
Query: 559 tggccgaagaacaacggtcaccgagcactgccgccggctccggaagtgtatctgaagaga 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggccgaagaacaacggtcaccgagcactgccgccggctccggaagtgtatctgaagaga 180
Query: 619 aggtgtacggcgggtgcgagggtccggacgctatgtacgtcaaactggtctcctcggacg 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggtgtacggcgggtgcgagggtccggacgctatgtacgtcaaactggtctcctcggacg 240
Query: 679 gccacgagttcatcgtgaagagagaacacgcgctcacctcgggaactataaaggccatgc 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccacgagttcatcgtgaagagagaacacgcgctcacctcgggaactataaaggccatgc 300
Query: 739 tgagcggaccgggacagttcgccgagaacgaggccaatgaggtcaacttcagagaaatac 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgagcggaccgggacagttcgccgagaacgaggccaatgaggtcaacttcagagaaatac 360
Query: 799 cctcccacgtgctgcagaaggtgtgtatgtatttcacgtacaaggtgcgctacacaaatt 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cctcccacgtgctgcagaaggtgtgtatgtatttcacgtacaaggtgcgctacacaaatt 420
Query: 859 cttctacagaaataccggaattccccatcgcaccggaaatagccctcgagctgctcatgg 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cttctacagaaataccggaattccccatcgcaccggaaatagccctcgagctgctcatgg 480
Query: 919 ccgccaacttcctggactgttaactcattgtcagcatttatctaataaggtcatgcttag 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccgccaacttcctggactgttaactcattgtcagcatttatctaataaggtcatgcttag 540
Query: 979 aattggatttctaattgtttgtattgaatatttaattaacaatgtaatttgtagttttta 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aattggatttctaattgtttgtattgaatatttaattaacaatgtaatttgtagttttta 600
Query: 1039 tttttcgagagttactcctgtaacttggtgagaatcaatatcgctttgcaattagccacc 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tttttcgagagttactcctgtaacttggtgagaatcaatatcgctttgcaattagccacc 660
Query: 1099 gacttcaaagtcgacgttaaagtcctttttagtcgttatttag-aaaaaaaaacattagt 1157
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 661 gacttcaaagtcgacgttaaagtcctttttagtcgttatttagaaaaaaaaaacattagt 720
Query: 1158 aacattagtctattgttgcgccatagtgcatatttgtttcgctagatggcgcgataacat 1217
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 721 aacattagtctattgttgcgccatagtacatatttgtttcgctagatggcgcgataacat 780
Query: 1218 atttatctttaaatgtactgggggttatcaaaattcgtcactatggctaacctgatatga 1277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 atttatctttaaatgtactgggggttatcaaaattcgtcactatggctaacctgatatga 840
Query: 1278 taacgcagtagtgttggagtataagaaaatttataggcgggaaagtattgttgatagcta 1337
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 841 taacgcagtagtgttggagtataagaaaatttataagcgggaaagtattgttgatagcta 900
Query: 1338 atttaaaatatactctgtgacccatactggaaacatttgatttaccattttgtatctgtg 1397
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 901 atttaaaatatactctgtgacccatactggaaacacttgatttaccattttgtatctgtg 960
Query: 1398 taaggaataaaccgtttaatttttctataacaataaattgttta 1441
|||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 961 taaggaataaactgtttaatttttctataacaataaattgttta 1004
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 240,970
Number of extensions: 5862
Number of successful extensions: 5862
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5861
Number of HSP's successfully gapped: 1
Length of query: 1441
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1424
Effective length of database: 8,119,229
Effective search space: 11561782096
Effective search space used: 11561782096
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)