BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18564 (UTR included)
(2608 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056B1D02 196 1e-49
BF01023A2A12 180 7e-45
BF01037B1H08 137 1e-31
BF01052B1H02 135 4e-31
BF01029B2F12 129 2e-29
BF01010B2F09 117 9e-26
BF01031B1E12 94 1e-18
BF01040A1G09 70 2e-11
>BF01056B1D02
Length = 778
Score = 196 bits (99), Expect = 1e-49
Identities = 142/156 (91%), Gaps = 4/156 (2%)
Strand = Plus / Plus
Query: 2453 gaaacctggcgagtaccaatgtgatcttttccgagtcatatgtactttctaagagtattt 2512
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 510 gaaacctggcaagtaccaatgtgatcttttccgagtcatatgtactttctaagggtagtt 569
Query: 2513 aggcaccactgactgacgttgaaggaaaacaccttgaggaaacctggtcttataatttca 2572
|| |||||||||| | ||||||||||| | ||||||||||||||||||||||||||
Sbjct: 570 agacaccactgacgg----tgaaggaaaacgtcgtgaggaaacctggtcttataatttca 625
Query: 2573 aattataagatttaaatcgccaacccatcttgagca 2608
|||||||||||| ||||||||||||| |||||||||
Sbjct: 626 aattataagattgaaatcgccaacccgtcttgagca 661
>BF01023A2A12
Length = 723
Score = 180 bits (91), Expect = 7e-45
Identities = 130/143 (90%)
Strand = Plus / Plus
Query: 2453 gaaacctggcgagtaccaatgtgatcttttccgagtcatatgtactttctaagagtattt 2512
|||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 105 gaaacctggcaagtaccaatgtgatcttttccgagtcacatgtactttctaacagtattt 164
Query: 2513 aggcaccactgactgacgttgaaggaaaacaccttgaggaaacctggtcttataatttca 2572
|| |||||||||| |||| ||||||| ||| | ||||||||||||||||||||||||||
Sbjct: 165 agacaccactgacggacggtgaaggagaacgtcgtgaggaaacctggtcttataatttca 224
Query: 2573 aattataagatttaaatcgccaa 2595
||||||||| || ||||| ||||
Sbjct: 225 aattataagtttgaaatcaccaa 247
>BF01037B1H08
Length = 758
Score = 137 bits (69), Expect = 1e-31
Identities = 90/97 (92%)
Strand = Plus / Plus
Query: 2447 gggttcgaaacctggcgagtaccaatgtgatcttttccgagtcatatgtactttctaaga 2506
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gggttcgaaacctggcaagtaccaatgtgatcttttccgagtcatatgtactttctaaga 179
Query: 2507 gtatttaggcaccactgactgacgttgaaggaaaaca 2543
||||||| |||||||||| |||| ||| |||||||
Sbjct: 180 atatttagtcaccactgacggacggtgagtgaaaaca 216
>BF01052B1H02
Length = 790
Score = 135 bits (68), Expect = 4e-31
Identities = 140/163 (85%), Gaps = 2/163 (1%)
Strand = Plus / Minus
Query: 2448 ggttcgaaacctggcgagtaccaatgtgatcttttc--cgagtcatatgtactttctaag 2505
|||||||| ||||| ||||| ||||||||||||| ||| | ||||| ||||| ||||
Sbjct: 513 ggttcgaatcctgggaagtactaatgtgatctttttttcgaatgatatgcactttttaag 454
Query: 2506 agtatttaggcaccactgactgacgttgaaggaaaacaccttgaggaaacctggtcttat 2565
||||||||| ||| |||||| |||| |||||||||||| | |||||||||||||||||||
Sbjct: 453 agtatttagacactactgacggacggtgaaggaaaacatcgtgaggaaacctggtcttat 394
Query: 2566 aatttcaaattataagatttaaatcgccaacccatcttgagca 2608
||||| |||| || || || ||||||||||||| |||||||||
Sbjct: 393 aatttgaaataattagtttgaaatcgccaacccgtcttgagca 351
>BF01029B2F12
Length = 749
Score = 129 bits (65), Expect = 2e-29
Identities = 108/121 (89%), Gaps = 1/121 (0%)
Strand = Plus / Minus
Query: 2447 gggttcgaaacctggcgagtaccaatgtgatcttttccgagtcatatgtactttctaaga 2506
|||||||||||||||| |||||||||||||| || | ||| ||||||||||||||||||
Sbjct: 662 gggttcgaaacctggcaagtaccaatgtgat-ttatgagagacatatgtactttctaaga 604
Query: 2507 gtatttaggcaccactgactgacgttgaaggaaaacaccttgaggaaacctggtcttata 2566
|||||||| |||||||||| |||| |||||||| ||| | |||||||||||||||||||
Sbjct: 603 gtatttagacaccactgacggacggtgaaggaagacatcgcgaggaaacctggtcttata 544
Query: 2567 a 2567
|
Sbjct: 543 a 543
>BF01010B2F09
Length = 764
Score = 117 bits (59), Expect = 9e-26
Identities = 137/161 (85%), Gaps = 4/161 (2%)
Strand = Plus / Minus
Query: 2447 gggttcgaaacctggcgagtaccaatgtgatcttttccgagtcatatgtactttctaaga 2506
|||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 gggttcgaaacctgacaagtaccaatgtgatcttcatcgagtcatatgtactttctaaga 442
Query: 2507 gtatttaggcaccactgactgacgttgaaggaaaacaccttgaggaaacctggtcttata 2566
|||||||| | |||||||| |||| ||||||| || | ||||||||||||| || ||
Sbjct: 441 gtatttagacgccactgacggacggtgaaggagaata---tgaggaaacctggatttgta 385
Query: 2567 atttcaaattataagatttaaatcgccaacccatcttgagc 2607
| | ||||||||| ||| |||||||||| || ||||||||
Sbjct: 384 a-taaaaattataaaattaaaatcgccaatccgtcttgagc 345
>BF01031B1E12
Length = 730
Score = 93.7 bits (47), Expect = 1e-18
Identities = 87/99 (87%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 2511 ttaggcaccactgactgacgttgaaggaaaacaccttgaggaaacctggtcttataatt- 2569
|||||||||||||| |||| ||| |||||||| | ||||||||||||||||||| |||
Sbjct: 36 ttaggcaccactgagagacggtgagggaaaacatcgtgaggaaacctggtcttatgatta 95
Query: 2570 tcaaattataagatttaaatcgccaacccatcttgagca 2608
|||| ||||||||| ||||||||||||| |||||||||
Sbjct: 96 gcaaagtataagattgaaatcgccaacccgtcttgagca 134
>BF01040A1G09
Length = 753
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 2566 aatttcaaattataagatttaaatcgccaacccatcttgagca 2608
|||||||||||||||| || |||||||||||||||||||||||
Sbjct: 10 aatttcaaattataagtttgaaatcgccaacccatcttgagca 52
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 380,720
Number of extensions: 9058
Number of successful extensions: 9058
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 9054
Number of HSP's successfully gapped: 8
Length of query: 2608
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2591
Effective length of database: 8,119,229
Effective search space: 21036922339
Effective search space used: 21036922339
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)