BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18565 (UTR included)
(5071 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056A1E11 769 0.0
>BF01056A1E11
Length = 421
Score = 769 bits (388), Expect = 0.0
Identities = 391/392 (99%)
Strand = Plus / Plus
Query: 4474 tgagcttcgattctttgagtggccatcttggtcatccgtcgcatacgctccagagttact 4533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgagcttcgattctttgagtggccatcttggtcatccgtcgcatacgctccagagttact 60
Query: 4534 tggaggatagcttctctgagccttcgcgagtggactgacgcggacgatgacgagactcgc 4593
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggaggatagcttctctgagccttcgcgagtggactgacgcggacgatgacgagactcgt 120
Query: 4594 gtgttcagttctgggtgatgtaattatagttttgaacaattattgttagaaattgtaaat 4653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgttcagttctgggtgatgtaattatagttttgaacaattattgttagaaattgtaaat 180
Query: 4654 aagattatctagttagttcttaagtgtaaggaagctaagtgcattcaaattattttgcag 4713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagattatctagttagttcttaagtgtaaggaagctaagtgcattcaaattattttgcag 240
Query: 4714 cccatagtttatgagagatacagataattatattagaaattagagaaatcattaaaagta 4773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cccatagtttatgagagatacagataattatattagaaattagagaaatcattaaaagta 300
Query: 4774 gataacgttgttttttatccgagtgctagtatgttctcagtatgttgtacttcggtgaat 4833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gataacgttgttttttatccgagtgctagtatgttctcagtatgttgtacttcggtgaat 360
Query: 4834 attaatagtcataataaatgaaatagttaata 4865
||||||||||||||||||||||||||||||||
Sbjct: 361 attaatagtcataataaatgaaatagttaata 392
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 449,905
Number of extensions: 7607
Number of successful extensions: 7607
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7607
Number of HSP's successfully gapped: 1
Length of query: 5071
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5053
Effective length of database: 8,109,745
Effective search space: 40978541485
Effective search space used: 40978541485
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)