BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18579 (UTR included)
(4117 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051B1B10 1516 0.0
>BF01051B1B10
Length = 781
Score = 1516 bits (765), Expect = 0.0
Identities = 771/773 (99%)
Strand = Plus / Plus
Query: 462 gttacagatattcctgcagtctacctatatacataggaaatgggcaaagaaagtaatctt 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gttacagatattcctgcagtctacctatatacataggaaatgggcaaagaaagtaatctt 68
Query: 522 gatgtggaaaaatctactaacggtagcgcaaaagaagacgaaagtaagaagaaaaagaaa 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gatgtggaaaaatctactaacggtagcgcaaaagaagacgaaagtaagaagaaaaagaaa 128
Query: 582 actaagaaacacaaaaaacgtaaaagaccagtggatgaggacactgaaaaaggctataaa 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 actaagaaacacaaaaaacgtaaaagaccagtggatgaggacactgaaaaaggctataaa 188
Query: 642 aaaagaaagaaagccaaaaaggaaaaacaaaaaagtccgaagccagagagtgaaacatca 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 aaaagaaagaaagccaaaaaggaaaaacaaaaaagtccgaagccagagagtgaaacatca 248
Query: 702 ctttctgatgtagaggagttaattaaaaaatccaaaagatgtaagcctgcaaacaaagaa 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ctttctgatgtagaggagttaattaaaaaatccaaaagatgtaagcctgcaaacaaagaa 308
Query: 762 tcttcattggaaattgcctcggctgatagtgcgaaaaatactaaaacgaaaaatggcaat 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tcttcattggaaattgcctcggctgatagtgcgaaaaatactaaaacgaaaaatggcaat 368
Query: 822 acgaatgctgatcagtcgcgtagtagtagcagaaatacaaagaaagttgacgacacttta 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 acgaatgctgatcagtcgcgtagtagtagcagaaatacaaagaaagttgacgacacttta 428
Query: 882 gaaattttatcttctacttctgaagccgaaaactatcaagacgactgtgctagcccagaa 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gaaattttatcttctacttctgaagccgaaaactatcaagacgactgtgctagcccagaa 488
Query: 942 cttactataattgaagatgatcttaatcttgaagaattgatgaaacaaaaagaaatgttg 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 cttactataattgaagatgatcttaatcttgaagaattgatgaaacaaaaagaaatgttg 548
Query: 1002 caagcacgtttaactgcctataattcagacaaaagcgatgaagaaactcgtcttaagaaa 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 caagcacgtttaactgcctataattcagacaaaagcgatgaagaaactcgtcttaagaaa 608
Query: 1062 aacacaaatgatgatgtgatctgtgtcgatgaagtatcgaaagaacccgtttccaaaaag 1121
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 aacacaaatgattatgtgatctgtgtcgatgaagtatcgaaagaacccgtttccaaaaag 668
Query: 1122 aaaaaagattcctcttctgaacacaaaaaaactaaaagtaaaaccactaagcagagacca 1181
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 aaaaaagattcctcttcttaacacaaaaaaactaaaagtaaaaccactaagcagagacca 728
Query: 1182 tcggagcttgaaaaaattaagttaaaacgtcaagaggaagatttaagagaaat 1234
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 tcggagcttgaaaaaattaagttaaaacgtcaagaggaagatttaagagaaat 781
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 532,744
Number of extensions: 10660
Number of successful extensions: 10660
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10660
Number of HSP's successfully gapped: 1
Length of query: 4117
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4099
Effective length of database: 8,109,745
Effective search space: 33241844755
Effective search space used: 33241844755
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)