BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18610 (UTR included)
(2368 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026B1D04 1285 0.0
>BF01026B1D04
Length = 655
Score = 1285 bits (648), Expect = 0.0
Identities = 651/652 (99%)
Strand = Plus / Plus
Query: 394 gtgtatgtacttcgtagttttatttatttcatttactgaaattataaaaataaataaata 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgtatgtacttcgtagttttatttatttcatttactgaaattataaaaataaataaata 60
Query: 454 tacataaattgtttaatatatatactagtgaaaatttatctacaaaaatgacctggggtt 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacataaattgtttaatatatatactagtgaaaatttatctacaaaaatgacctggggtt 120
Query: 514 ttgttacttgtggtccaaacgaagctttagtggtatctggatgttgctactcaaagcctc 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgttacttgtggtccaaacgaagctttagtggtatctggatgttgctactcaaagcctc 180
Query: 574 ttttggtaccgggcggtcgagcatttgtgtggcccgccctacagcgtgtccagcggatat 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttttggtaccgggcggtcgagcatttgtgtggcccgccctacagcgtgtccagcggatat 240
Query: 634 cactgaacactatgacactccaggttgagtcacccactgtgtacacaagccagggtgtac 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cactgaacactatgacactccaggttgagtcacccactgtgtacacaagccagggtgtac 300
Query: 694 caatatctgtcacaggaatagcacaggttaagattcaaggtcaaaatgctgaaatgttac 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caatatctgtcacaggaatagcacaggttaagattcaaggtcaaaatgctgaaatgttac 360
Query: 754 tctcagcctgtgaacaatttcttgggaaatcagaacaagaaattcaacatatagctcttg 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tctcagcctgtgaacaatttcttgggaaatcagaacaagaaattcaacatatagctcttg 420
Query: 814 ttactcttgaaggccatcagagggctattatggggtctatgactgtcgaagaaatataca 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttactcttgaaggccatcagagggctattatggggtctatgactgtcgaagaaatataca 480
Query: 874 aggacaggaaagtgttttcaaaaaaggtctttgaagtggcctctagtgatctaataaata 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aggacaggaaagtgttttcaaaaaaggtctttgaagtggcctctagtgatctaataaata 540
Query: 934 tgggaattacggttgtttcatacacactgaaagacatcagagatgaggagggctacctaa 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgggaattacggttgtttcatacacactgaaagacatcagagatgaggagggctacctaa 600
Query: 994 aagcgttgggtatggcccgtacagcggaagtaaagcgagatgcacgtatagg 1045
||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 601 aagcgttgggtatggcccgtacagcagaagtaaagcgagatgcacgtatagg 652
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 320,467
Number of extensions: 7377
Number of successful extensions: 7377
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7377
Number of HSP's successfully gapped: 1
Length of query: 2368
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2351
Effective length of database: 8,119,229
Effective search space: 19088307379
Effective search space used: 19088307379
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)