BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18615 (UTR included)
(2869 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042A2H03 1528 0.0
>BF01042A2H03
Length = 792
Score = 1528 bits (771), Expect = 0.0
Identities = 786/792 (99%)
Strand = Plus / Plus
Query: 1660 aagccaataagacaacaatgattagtcaatatattccgctccctgaacttattgatgaag 1719
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 aagccaataagacaacaatgattagtcaatcnnntccgctccctgaacttattgatgaag 60
Query: 1720 ttaaagagcttcaacccctggaacgtgagtatgaaaatctggttgttcaattacctaagg 1779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttaaagagcttcaacccctggaacgtgagtatgaaaatctggttgttcaattacctaagg 120
Query: 1780 attgctcaagcgtgactggacctgaccaagtttatttaataaaccctggccattctccga 1839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attgctcaagcgtgactggacctgaccaagtttatttaataaaccctggccattctccga 180
Query: 1840 ttgagaccttttgtaccaatggaagtacccttattcaacgacgttacaacggatccgtag 1899
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgagaccttttgtatcaatggaagtacccttattcaacgacgttacaacggatccgtag 240
Query: 1900 aatttaataggaaatttgctcaatacgtgcaaggttttggtaacgcagcctccgaatttt 1959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatttaataggaaatttgctcaatacgtgcaaggttttggtaacgcagcctccgaatttt 300
Query: 1960 ggcttggcttggaatcgatgcaccaattgaccgctgataactgctcttctatgaggatcg 2019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggcttggcttggaatcgatgcaccaattgaccgctgataactgctcttctatgaggatcg 360
Query: 2020 agatgaccgatatttatggaagctcttggcatgctgaatatgatcatttctccgttggaa 2079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agatgaccgatatttatggaagctcttggcatgctgaatatgatcatttctccgttggaa 420
Query: 2080 gcgctgatactggatatgttttgactgtgagcggtttcagaggcaatgctagtgacgctt 2139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcgctgatactggatatgttttgactgtgagcggtttcagaggcaatgctagtgacgctt 480
Query: 2140 ttgagtaccaaaaccatatggaattttctgccatcgaccacgacagagacatctcgaata 2199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttgagtaccaaaaccatatggaattttctgccatcgaccacgacagagacatctcgaata 540
Query: 2200 ctcattgcgctgccaactatgaaggaggttggtggttctctcattgccagcacgtgaata 2259
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 541 ctcattgcgctgccaactatgaaggaggttggtggttctctcactgccagcacgtgaata 600
Query: 2260 tcaatggcaagtacactcttggtttgacctggtttgactctctaaggaatgagtggatag 2319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcaatggcaagtacactcttggtttgacctggtttgactctctaaggaatgagtggatag 660
Query: 2320 cggttgcaaccagtgagatgcgcctattccgtaacaaacgctgtacttaaattacaagat 2379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cggttgcaaccagtgagatgcgcctattccgtaacaaacgctgtacttaaattacaagat 720
Query: 2380 actgcgttttcaattcatattatttaaacatctacatttaaattattgtaactattatta 2439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 actgcgttttcaattcatattatttaaacatctacatttaaattattgtaactattatta 780
Query: 2440 tgagtaatcatg 2451
||||||||||||
Sbjct: 781 tgagtaatcatg 792
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 344,505
Number of extensions: 7048
Number of successful extensions: 7048
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7047
Number of HSP's successfully gapped: 1
Length of query: 2869
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2852
Effective length of database: 8,119,229
Effective search space: 23156041108
Effective search space used: 23156041108
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)