BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN18620 (UTR included)
         (4696 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01038B2C03                                                          311   6e-84

>BF01038B2C03
          Length = 208

 Score =   bits (157), Expect = 6e-84
 Identities = 197/209 (94%), Gaps = 1/209 (0%)
 Strand = Plus / Plus

                                                                        
Query: 4272 aaggtttacaattttagaggatagttactaacttagtaaaagaaactaaaaataagaatt 4331
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    aaggtttacaattttagaggatagttactaacttagtaaaagaaactaaaaataagaatt 60

                                                                        
Query: 4332 tttaaaaattaaactgtaaaactatgtagtttttatgtagaaatttcatatagcataaag 4391
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tttaaaatttaaactgtaaaactatgtagtttttatgtagaaatttcatatagcataaag 120

                                                                        
Query: 4392 ccaacgcctaagaaatattaagaaatattaaatgtcactttcactatggaaattgtcatt 4451
            |||| |||||| ||    | |   ||||||||||||||||||||||||||||||||||| 
Sbjct: 121  ccaatgcctaa-aaggcctcacgcatattaaatgtcactttcactatggaaattgtcata 179

                                         
Query: 4452 ccaatatttttttctactatttttataag 4480
            |||||||||||||||||||||||||||||
Sbjct: 180  ccaatatttttttctactatttttataag 208


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 630,514
Number of extensions: 11697
Number of successful extensions: 11697
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11697
Number of HSP's successfully gapped: 2
Length of query: 4696
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4678
Effective length of database: 8,109,745
Effective search space: 37937387110
Effective search space used: 37937387110
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)