BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18621 (UTR included)
(12,064 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051A1D11 1546 0.0
>BF01051A1D11
Length = 800
Score = 1546 bits (780), Expect = 0.0
Identities = 794/800 (99%)
Strand = Plus / Plus
Query: 10257 gaaaaagaaccaccaaccttagtatttagcgcagaagaaaccacaacagcaatggcagtg 10316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaaaagaaccaccaaccttagtatttagcgcagaagaaaccacaacagcaatggcagtg 60
Query: 10317 ccatcgacagaatctttgcctccaacaacaacaacaacaatggcaaccattccttccact 10376
||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 61 ccatcgacagaatctttgcctccgacaacaacaacaacaatggcacccattccttccact 120
Query: 10377 accactgctcgagcatcaaccactaccagaaggccccctccagcaccacaacctggatgt 10436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 accactgctcgagcatcaaccactaccagaaggccccctccagcaccacaacctggatgt 180
Query: 10437 gcacttgcttttgatccacaatatgaaattggtgatccgttggaaggatacagattcggt 10496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcacttgcttttgatccacaatatgaaattggtgatccgttggaaggatacagattcggt 240
Query: 10497 acgaaagaggatagccgcatagaatacgctaaattacccggaagacaattagaaggtttt 10556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acgaaagaggatagccgcatagaatacgctaaattacccggaagacaattagaaggtttt 300
Query: 10557 gatttaactataagtttccgaacatttgatcaacatggcggtttaatattttatgccgct 10616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatttaactataagtttccgaacatttgatcaacatggcggtttaatattttatgccgct 360
Query: 10617 gctgaaagagtcccaacccagtttttggcgttatatatgaaagatgctaagctacacttc 10676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gctgaaagagtcccaacccagtttttggcgttatatatgaaagatgctaagctacacttc 420
Query: 10677 acgtttaactgcggtggagagacaggactagtcacgtcatcaacaacatacaatgacact 10736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acgtttaactgcggtggagagacaggactagtcacgtcatcaacaacatacaatgacact 480
Query: 10737 gaatggcatacagttacactcgtaagaaataacggtcacggcaaactaactgttaactct 10796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaatggcatacagttacactcgtaagaaataacggtcacggcaaactaactgttaactct 540
Query: 10797 gaaagaatcggcgaaactagtgtgtcatgttatgcaccaacagtactcgctccaccgtac 10856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaaagaatcggcgaaactagtgtgtcatgttatgcaccaacagtactcgctccaccgtac 600
Query: 10857 tattatggtggattaagaaatgttactaatactattagtcaaaatctaatggacttctac 10916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tattatggtggattaagaaatgttactaatactattagtcaaaatctaatggacttctac 660
Query: 10917 caaccatttaaaggatgtctaaaaggtttgatgatgaacgggcaatatgttacaaacatc 10976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 caaccatttaaaggatgtctaaaaggtttgatgatgaacgggcaatatgttacaaacatc 720
Query: 10977 ttagaccgagtaaatgctctacgctgcacagacaacgtcgagcaaggggtctactttggt 11036
|| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 721 ttnnacngagtaaatgctctacgctgcacagacaacgtcgngcaaggggtctactttggt 780
Query: 11037 ccttcaaataacaatcacag 11056
||||||||||||||||||||
Sbjct: 781 ccttcaaataacaatcacag 800
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 184,228
Number of extensions: 21056
Number of successful extensions: 21056
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 21053
Number of HSP's successfully gapped: 1
Length of query: 12064
Length of database: 8,280,457
Length adjustment: 19
Effective length of query: 12045
Effective length of database: 8,100,261
Effective search space: 97567643745
Effective search space used: 97567643745
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)