BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18629 (UTR included)
(2374 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1379_C1 1853 0.0
>BF14_1379_C1
Length = 964
Score = 1853 bits (935), Expect = 0.0
Identities = 960/967 (99%), Gaps = 4/967 (0%)
Strand = Plus / Plus
Query: 1196 tgagaaagaaggcttggagagtgttaatgttcaagaaatcttattagaaatgcgcaaaga 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgagaaagaaggcttggagagtgttaatgttcaagaaatcttattagaaatgcgcaaaga 60
Query: 1256 tcgtatgggtttgatacaaacaccagggcagctccgc-ttttcttaccaggccatcatag 1314
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 61 tcgtatgggtttgatacaaacaccagggcagctccnnnttttcttaccaggccatcatag 120
Query: 1315 aaggtgcaaaacgattcagtcccgacttcaaagaggatcagaataatatggaggagagta 1374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaggtgcaaaacgattcagtcccgacttcaaagaggatcagaataatatggaggagagta 180
Query: 1375 tatattcgtcggtcgctgaggaagaagctccccctccaccgcctcgggctgagagtctta 1434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatattcgtcggtcgctgaggaagaagctccccctccaccgcctcgggctgagagtctta 240
Query: 1435 caagagcgccagtccgacctctgccagccatacctactagcgcatcgctaggcaacctca 1494
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 241 caagagcgccagtccgacctctgccagccatacctactagtgcatcgctaggcaacctca 300
Query: 1495 actacacgtgctcagcggagagctccagttctgacgagggcgcccccactcctcctgccc 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 actacacgtgctcagcggagagctccagttctgacgagggcgcccccactcctcctgccc 360
Query: 1555 gagaccactccccttgcccctcccaatctccctccccctctccctctcctactcgctctc 1614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagaccactccccttgcccctcccaatctccctccccctctccctctcctactcgctctc 420
Query: 1615 acacgtcgccggcatcctccgccgacgacgaagacgacgagcccccgccagcacctattg 1674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acacgtcgccggcatcctccgccgacgacgaagacgacgagcccccgccagcacctattg 480
Query: 1675 ttgaaagttgcagcgaggtcgtggagacggtgaggcgacgtcgcactcgcgagctggcgg 1734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttgaaagttgcagcgaggtcgtggagacggtgaggcgacgtcgcactcgcgagctggcgg 540
Query: 1735 agcgcgtctccggtatgaagaagcgtgcgagacaccacgaacgatggacgacactcaaga 1794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agcgcgtctccggtatgaagaagcgtgcgagacaccacgaacgatggacgacactcaaga 600
Query: 1795 ggtccctgtacacaccactcaccatcaccttcggattcatactagccggcatacttatat 1854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggtccctgtacacaccactcaccatcaccttcggattcatactagccggcatacttatat 660
Query: 1855 acacatacgtcaaacattaacaataccatttatatattaaatgtatttattattataatt 1914
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 661 acacatacgtcaaacattaacaataccatttatatattaaatgtat---ttattataatt 717
Query: 1915 attatcgaacggttcggcgtcactcgaatcaatgtaaattagttaataacccctaaagga 1974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 attatcgaacggttcggcgtcactcgaatcaatgtaaattagttaataacccctaaagga 777
Query: 1975 ctaactatagacggtttgaattataatttgtatttaatcttgtttactttttaaataacc 2034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 ctaactatagacggtttgaattataatttgtatttaatcttgtttactttttaaataacc 837
Query: 2035 gagtaaatgatgataacccaccttatgtaatgtcaattaatgatatacaccatggcatat 2094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 gagtaaatgatgataacccaccttatgtaatgtcaattaatgatatacaccatggcatat 897
Query: 2095 ccgactggactatgatcccatctcgatcattcatatatgcatacgttccatatgcatttg 2154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898 ccgactggactatgatcccatctcgatcattcatatatgcatacgttccatatgcatttg 957
Query: 2155 cataata 2161
|||||||
Sbjct: 958 cataata 964
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 310,250
Number of extensions: 7678
Number of successful extensions: 7678
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7676
Number of HSP's successfully gapped: 1
Length of query: 2374
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2357
Effective length of database: 8,119,229
Effective search space: 19137022753
Effective search space used: 19137022753
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)