BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18650 (UTR included)
(1795 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 133 1e-30
BF14_729_C1 103 1e-21
BF01011A1H06 94 9e-19
BF01035X1C09 92 4e-18
BF01005B1E12 84 9e-16
BF14_729_C2 82 4e-15
BF01022B1H01 80 1e-14
BF01017A2H11 78 5e-14
BF01058B2C06 76 2e-13
BF01012B1C01 72 3e-12
BF01025A1D01 72 3e-12
BF14_2189_C1 72 3e-12
BF01024A1H07 70 1e-11
>BF14_729_C3
Length = 2041
Score = 133 bits (67), Expect = 1e-30
Identities = 154/183 (84%), Gaps = 1/183 (0%)
Strand = Plus / Minus
Query: 13 tacatactcccaacgtatcggttactttgcagcaaccgtgatcacggccagacgagatga 72
|||||| |||| |||| |||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 1644 tacataatcccgacgtttcggttactttgcagcaaccgtgatcacgggcagacgaggtgt 1585
Query: 73 gaatgtctgttagttggt-cgtgttatttatcatttaccgccaacgattttttgattttc 131
|||||||||| ||||||| | ||||||||||||| |||||||| |||||| || ||
Sbjct: 1584 gaatgtctgtcagttggtccttgttatttatcatctaccgccatcgatttcttaatnnnn 1525
Query: 132 tggcgtattgctttggttacctacagaatacgctcactgggtctcgaggtcctgcgctgt 191
||||||| ||| ||| | || |||||| ||||||| | |||| ||||||||||| |||
Sbjct: 1524 tggcgtaccgctctggatgccggcagaatgcgctcacggtgtcttgaggtcctgcggtgt 1465
Query: 192 ggt 194
|||
Sbjct: 1464 ggt 1462
Score = 129 bits (65), Expect = 2e-29
Identities = 116/133 (87%)
Strand = Plus / Minus
Query: 418 gaatggtactcttaataggtttcaagaattggctcattttcttgtgtggattgtctatag 477
||||| |||| || || ||| ||||||||||||||| |||||| ||||| |||| ||||
Sbjct: 1119 gaatgttacttttgattggtctcaagaattggctcactttcttatgtggtttgtaaatag 1060
Query: 478 tctttatagaaacctttttccagatgttgcctattctgtcagtaactcggttcacatatg 537
| || || |||||||| ||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 1059 ttttaatggaaaccttcttcaagatgttgcctattctgtcagtaactcccttcacatatg 1000
Query: 538 gtagtatcgcagg 550
|||||||||||||
Sbjct: 999 gtagtatcgcagg 987
>BF14_729_C1
Length = 981
Score = 103 bits (52), Expect = 1e-21
Identities = 94/108 (87%)
Strand = Plus / Plus
Query: 418 gaatggtactcttaataggtttcaagaattggctcattttcttgtgtggattgtctatag 477
||||| ||||||| |||||| ||||||||||||||| |||||| ||||| |||| ||||
Sbjct: 32 gaatgttactcttgataggtctcaagaattggctcactttcttatgtggtttgtgaatag 91
Query: 478 tctttatagaaacctttttccagatgttgcctattctgtcagtaactc 525
|||| || |||| ||| ||| | |||||||||||||||||||||||||
Sbjct: 92 tcttgatggaaagcttcttcaaaatgttgcctattctgtcagtaactc 139
>BF01011A1H06
Length = 739
Score = 93.7 bits (47), Expect = 9e-19
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 13 tacatactcccaacgtatcggttactttgcagcaaccgtgatcacggccagacgagatga 72
||||||||||| |||| ||||||||||| ||| |||||||||||||| |||||||||||
Sbjct: 516 tacatactcccgacgtttcggttacttttcagtaaccgtgatcacgggcagacgagatgt 457
Query: 73 gaatgtctgttagttggtc 91
|| ||||||| ||||||||
Sbjct: 456 gagtgtctgtcagttggtc 438
>BF01035X1C09
Length = 778
Score = 91.7 bits (46), Expect = 4e-18
Identities = 97/113 (85%), Gaps = 2/113 (1%)
Strand = Plus / Plus
Query: 2 attattttaagtacatactcccaacgtatcggttactttgcagcaaccgtgatcacggcc 61
||||| |||| ||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 597 attatcttaactacattatcccaacgtttcggttactttgcagcaaccgtgatcacggga 656
Query: 62 agacgagatgagaatgtctgttagttggtcgtgttatttatcatttaccgcca 114
||||||||||||| ||||| |||| ||| |||||||| || | ||||||||
Sbjct: 657 agacgagatgaga--ttctgtgagtttgtcctgttatttgtcgtctaccgcca 707
>BF01005B1E12
Length = 657
Score = 83.8 bits (42), Expect = 9e-16
Identities = 42/42 (100%)
Strand = Plus / Minus
Query: 30 tcggttactttgcagcaaccgtgatcacggccagacgagatg 71
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tcggttactttgcagcaaccgtgatcacggccagacgagatg 301
>BF14_729_C2
Length = 1289
Score = 81.8 bits (41), Expect = 4e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 13 tacatactcccaacgtatcggttactttgcagcaaccgtgatcacggccagacgaga 69
||||||||||| |||| ||||||||||| |||||||||||||||||| |||||||||
Sbjct: 584 tacatactcccgacgtttcggttacttttcagcaaccgtgatcacgggcagacgaga 528
>BF01022B1H01
Length = 596
Score = 79.8 bits (40), Expect = 1e-14
Identities = 85/100 (85%)
Strand = Plus / Minus
Query: 30 tcggttactttgcagcaaccgtgatcacggccagacgagatgagaatgtctgttagttgg 89
||||||||| ||||||||||||||||||| | ||||||||| ||| ||||||||||||
Sbjct: 330 tcggttactctgcagcaaccgtgatcacgagtaaacgagatgaaaatatctgttagttgg 271
Query: 90 tcgtgttatttatcatttaccgccaacgattttttgattt 129
|| ||||||| || || | ||||||| ||||||| ||||
Sbjct: 270 tcctgttattaatgatcttccgccaaaaatttttttattt 231
>BF01017A2H11
Length = 713
Score = 77.8 bits (39), Expect = 5e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 16 atactcccaacgtatcggttactttgcagcaaccgtgatcacggccagacgagatgagaa 75
|||||||| |||| | ||||||||| |||||||||||||||||| ||||||||||| ||
Sbjct: 86 atactcccgacgttttggttacttttcagcaaccgtgatcacgggcagacgagatgtgag 27
Query: 76 tgtctgttagttggt 90
||| ||| |||||||
Sbjct: 26 tgtatgtcagttggt 12
>BF01058B2C06
Length = 772
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 13 tacatactcccaacgtatcggttactttgcagcaaccgtgatcacggccagacgagat 70
|||||| |||| |||| ||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 426 tacatattcccgacgtttcggttactttgctgcagccgtgatcacggccagacgagat 483
>BF01012B1C01
Length = 950
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 13 tacatactcccaacgtatcggttactttgcagcaaccgtgatcacggccagacgag 68
|||| |||||| |||| ||||||||||||||||| |||||||||||| ||||||||
Sbjct: 709 tacacactcccgacgtttcggttactttgcagcagccgtgatcacggacagacgag 654
>BF01025A1D01
Length = 764
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 19 ctcccaacgtatcggttactttgcagcaaccgtgatcacggccagacgagat 70
||||| |||| ||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 434 ctcccgacgtttcggttacttttcagcaaccgtgatcacgggcagacgagat 485
>BF14_2189_C1
Length = 1416
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 13 tacatactcccaacgtatcggttactttgcagcaaccgtgatcacggccagacgagatga 72
|||||| |||| |||| || ||||||||||||||||||||||||||| ||||||| |||
Sbjct: 215 tacatagtcccgacgtttctgttactttgcagcaaccgtgatcacggacagacgacatgt 156
Query: 73 gaat 76
||||
Sbjct: 155 gaat 152
>BF01024A1H07
Length = 726
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 25 acgtatcggttactttgcagcaaccgtgatcacggccagacgagatg 71
|||| ||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 691 acgtttcggttacttttcagcaaccgtgatcacgggcagacgagatg 645
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 208,128
Number of extensions: 3974
Number of successful extensions: 3974
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 3972
Number of HSP's successfully gapped: 14
Length of query: 1795
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1778
Effective length of database: 8,119,229
Effective search space: 14435989162
Effective search space used: 14435989162
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)