BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18675 (UTR included)
(2107 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1626_C1 74 1e-12
BF01040A1G09 68 6e-11
BF01033A1F05 68 6e-11
BF14_1547_C2 68 6e-11
>BF14_1626_C1
Length = 705
Score = 73.8 bits (37), Expect = 1e-12
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 1759 tacatataaatatatatatatatatatatatacatacctatatatatat 1807
|||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 636 tacatatatatatatatatatatatatatatacatatatatatatatat 684
>BF01040A1G09
Length = 753
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1762 atataaatatatatatatatatatatatacatacctatatatatat 1807
||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 626 atatatatatatatatatatatatatatacatatatatatatatat 581
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1762 atataaatatatatatatatatatatatacatacctatatatatat 1807
||||| ||||||||||||||||||||||| |||| |||||||||||
Sbjct: 630 atatatatatatatatatatatatatatatatacatatatatatat 585
>BF01033A1F05
Length = 770
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1762 atataaatatatatatatatatatatatacatacctatatatatat 1807
||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 535 atatatatatatatatatatatatatatacatatatatatatatat 490
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1762 atataaatatatatatatatatatatatacatacctatatatatat 1807
||||| ||||||||||||||||||||||| |||| |||||||||||
Sbjct: 539 atatatatatatatatatatatatatatatatacatatatatatat 494
>BF14_1547_C2
Length = 723
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 1762 atataaatatatatatatatatatatatacatacctatatatatat 1807
||||| ||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 678 atatatatatatatatatatatatatatatatatctatatatatat 723
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 209,765
Number of extensions: 12513
Number of successful extensions: 12513
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 12488
Number of HSP's successfully gapped: 7
Length of query: 2107
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2090
Effective length of database: 8,119,229
Effective search space: 16969188610
Effective search space used: 16969188610
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)