BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18676 (UTR included)
(2002 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023A1F12 1402 0.0
>BF01023A1F12
Length = 759
Score = 1402 bits (707), Expect = 0.0
Identities = 744/759 (98%)
Strand = Plus / Plus
Query: 323 cgcgtctgtaatctaatgttttaaattaataaacgaaagacttaagacttctacatgtat 382
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 cgcgtctgtaatctaatgttttaaattaataaacgaaagacttaagacttcttcatgtat 60
Query: 383 cgacttaacaaaaacaatatggtctaataagaaaacgaagctaaagtcctaaatctttat 442
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61 cgacttaacaaaaacaatatggtctaataagaaaacgaagcttaagtcctaaatctttat 120
Query: 443 gtcaaaggtaggctttttaaaactaagcaaaagctctttttaaagtacgtatcaaatgat 502
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcaaaggtaggctttttaaaattaagcaaaagctctttttaaagtacgtatcaaatgat 180
Query: 503 gtcgcgccaagttgactcaaatataagcaagcttcttgatggtagcggcttaaatgggga 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtcgcgccaagttgactcaaatataagcaagcttcttgatggtagcggcttaaatgggga 240
Query: 563 agaaaatgacttttgtgacttcacaatagcagatcaaaattctgttgctgaatctcaggg 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 241 agaaaatgacttttgtgacttcacaatagcagatcaaaattctgttgctgaatctcaagg 300
Query: 623 tattaccccaactactccatccaattttaaacccatacttggaagtaatgtcacgtacgt 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tattaccccaactactccatccaattttaaacccatacttggaagtaatgtcacgtacgt 360
Query: 683 tgtcgcttcagtaatattaaatgaaaaaaatgaattgcttatgatgcaagaagcaaaaga 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtcgcttcagtaatattaaatgaaaaaaatgaattgcttatgatgcaagaagcaaaaga 420
Query: 743 aagttgtgctggaaaatggtacttacctgctggacgaatggaaaaaggtgaaacaataat 802
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 421 aagttgtgctggaaaatggtacttacctgccggacgaatggaaaaaggtgaaacaataat 480
Query: 803 tcaggctgcaaccagagaggtactcgaggaaacagggttgcattgtaagctggatacttt 862
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 481 tcaagctgcaaccagagaggtacttgaggaaacagggttgcattgtaagctggatacttt 540
Query: 863 actgatggtggaaacagctggtggtacctggtttagatttgttttaacaggaaatattgt 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 actgatggtggaaacagctggtggtacctggtttagatttgttttaacaggaaatattgt 600
Query: 923 tggaggggaccttaaaacacccgctaatgctgacaaagaatccttacaagccaaatggat 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tggaggggaccttaaaacacccgctaatgctgacaaagaatccttacaagccaaatggat 660
Query: 983 agccaatctacaagaaatatcactgagatcaaatgatatcttacacctcattgagaaagc 1042
||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 661 agccaatctacaannnntatcactgagatnnnatgatatcttacacctcattgagnaagc 720
Query: 1043 taaaatgtacaaacagaaaccacctggtgtaaattggca 1081
|||||||||||||||||||||||||||||||||||||||
Sbjct: 721 taaaatgtacaaacagaaaccacctggtgtaaattggca 759
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 315,808
Number of extensions: 7780
Number of successful extensions: 7780
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7780
Number of HSP's successfully gapped: 1
Length of query: 2002
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1985
Effective length of database: 8,119,229
Effective search space: 16116669565
Effective search space used: 16116669565
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)