BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18685 (UTR included)
(1549 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2621_C1 1505 0.0
>BF14_2621_C1
Length = 884
Score = 1505 bits (759), Expect = 0.0
Identities = 783/791 (98%)
Strand = Plus / Plus
Query: 481 taagtttataagaatttattatggaaggcgataaggcagaagaaacaaaatctttttccg 540
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 78 taagtttataagaatttattatggaaggcgataaggcagatgaaacaaaatctttttccg 137
Query: 541 gaattcctgaagcagtgtttgtggacaatgtggatgagtttatgaacttaccagaaaact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 gaattcctgaagcagtgtttgtggacaatgtggatgagtttatgaacttaccagaaaact 197
Query: 601 ctggcggtgttgaaaaagtattaagacagttggatgagcaacatggtaaatataaattca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ctggcggtgttgaaaaagtattaagacagttggatgagcaacatggtaaatataaattca 257
Query: 661 tggaatatacactcaatacaaagagaaggcgccttcggcagcaaatcccagacttggcca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tggaatatacactcaatacaaagagaaggcgccttcggcagcaaatcccagacttggcca 317
Query: 721 gatcactagatgtgattgaaaagttgaggtcacaaaaagaagacatggacacacagttcc 780
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 318 gatcactagatgtgattgaaaagttgaggacacaaaaagaagacatggacacacagttcc 377
Query: 781 ttctcagtgatcaagtttttgtaaaggcaaatattaaaccaacaaaaactgtttgtttat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ttctcagtgatcaagtttttgtaaaggcaaatattaaaccaacaaaaactgtttgtttat 437
Query: 841 ggctcggagcaaatgtaatgttggagtattctttggaagatgctgaaaaactcctcacta 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ggctcggagcaaatgtaatgttggagtattctttggaagatgctgaaaaactcctcacta 497
Query: 901 ccaatatggctacggcgaaaaaaaatcttgcatgtgtagaacatgatttagattttttga 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ccaatatggctacggcgaaaaaaaatcttgcatgtgtagaacatgatttagattttttga 557
Query: 961 gagatcaatggacaacaacagaagttaatatggccagagtttacaattgggatgtcaaga 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gagatcaatggacaacaacagaagttaatatggccagagtttacaattgggatgtcaaga 617
Query: 1021 gacgtcaggctgctaaaggcgcctgttgattaaaattgatttaataattattattaataa 1080
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 618 gacgtcaggctgctaaaggcgcctgttgattaaaattgatttaataattattataaataa 677
Query: 1081 atgcattaattctttctattaaatattagttcacaaatcatattatttaaatttttcaaa 1140
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 678 atgcattaattctttctattaactattagttcacaaatcatattatttaaatttttcaaa 737
Query: 1141 actttaagacttataatctctacaaaaatactattagacatatttataatttctaaaagt 1200
| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 738 attttaggacttataatctctacaaaattactattagacatatttataatttctaaaagt 797
Query: 1201 ataacattgcattggcaaagttatccattaaaagctttccctcctgtcgccattatatat 1260
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 798 ataacattgcattggcaaagttatccattaaaagctttccctcctgtcgccattatgtat 857
Query: 1261 atatatatata 1271
|||||||||||
Sbjct: 858 atatatatata 868
Score = 107 bits (54), Expect = 5e-23
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 332 ttttgaaatcttactaccaattctatttttataatagaataaaaaagcatattcgaatag 391
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 3 ttttgaaatcttactaccaattctatttttataatagaataaagaatcatattcgaatag 62
Query: 392 cg 393
||
Sbjct: 63 cg 64
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 339,287
Number of extensions: 14871
Number of successful extensions: 14871
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 14870
Number of HSP's successfully gapped: 2
Length of query: 1549
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1532
Effective length of database: 8,119,229
Effective search space: 12438658828
Effective search space used: 12438658828
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)