BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18709 (UTR included)
(1885 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3274_C1 1606 0.0
>BF14_3274_C1
Length = 877
Score = 1606 bits (810), Expect = 0.0
Identities = 862/878 (98%), Gaps = 1/878 (0%)
Strand = Plus / Plus
Query: 111 atataagtaacctaatccgccaatttattaacaagaaataataaagagcaacaataacaa 170
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 atataagtaacctaatccgccaattgattaacaagaaataataaagagcaacaataacaa 60
Query: 171 acatcgttttatttcgtacgaattatgaaacgagtgtctgtatacagaaacaaagaggaa 230
|||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||
Sbjct: 61 acatcgttttatttcgtacgaattatgaaacgtgcgtctatatacagaaacaaagaggaa 120
Query: 231 aaagatggaaaacttatggccgtggaagacacgattaaagatttcaaaaaagcaatatca 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaagatggaaaacttatggccgtggaagacacgattaaagatttcaaaaaagcaatatca 180
Query: 291 ttggaattcaatttaaccgaagatgatatcaaattgtattcatccaatggctgtgaaatt 350
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 181 ttggaattcaatttaaccgaagatgatatcaaactgtattcatccaatggctgtgaaatt 240
Query: 351 aacgatatacgagtgataagggacgacgaaaaactgtatttgtcttcagacgtctgtgat 410
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 241 aacgatatacgagtgataagggacgacgaaaaactgtatttgtcttcagacaattgtgat 300
Query: 411 attgcaaaaagggaggggaacatgcatgtatacgatgaaaaaaacaaggtatcagactgg 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attgcaaaaagggaggggaacatgcatgtatacgatgaaaaaaacaaggtatcagactgg 360
Query: 471 atcaaattaaatgtcggtggaaaacacttcatgacctcaaggtctacacttctagcaaaa 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atcaaattaaatgtcggtggaaaacacttcatgacctcaaggtctacacttctagcaaaa 420
Query: 531 gaacccttgtcaatgctagccagaatgtttgctgatgataataatgtctacttaatgaat 590
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 421 gaacccttgtcaatgctagccagaatgtttgctgatgataataacgtctacttaatgaat 480
Query: 591 cccagcactaaagattctactggggcgtacttaattgacagaagtccagaatatttcgaa 650
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cccagcgcaaaagattctactggggcgtacttaattgacagaagtccagaatatttcgaa 540
Query: 651 cctatattaaactatttaagacatggtgatgttattttagacaagaatgttaatcctaga 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cctatattaaactatttaagacatggtgatgttattttagacaagaatgttaatcctaga 600
Query: 711 ggggtcttggaagaagcagtgttttatggtttagactcgatgatacctcaattaaatcat 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggggtcttggaagaagcagtgttttatggtttagactcgatgatacctcaattaaatcat 660
Query: 771 ttagttgacaaatcaatgagcagtagcgggaacaatcaatctttgactcgtatggatgta 830
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 661 ttagttgacaaatcaatgagcagtagtgggaacaatcaatctttgactcgtatggatgta 720
Query: 831 ataagacttgtcataatgacaccaaccacatctgagctgcgtttccaaggggtgaactta 890
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 721 ataaggcttgtcataatgacaccaaccacatctgagctgcggttccaaggggtgaactta 780
Query: 891 gctggggcagatcttaatagactggacttgagatatataaattttaagtatgcctgtctg 950
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gctggtgcagatcttaatagactggacttgagatatataaattttaagtatgcctgtctg 840
Query: 951 tcaaaatgcaatctgagtggtgcaaatttatcgcactg 988
|||||||||||||||||| |||||||||||||||||||
Sbjct: 841 tcaaaatgcaatctgagt-gtgcaaatttatcgcactg 877
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 305,974
Number of extensions: 20594
Number of successful extensions: 20594
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 20593
Number of HSP's successfully gapped: 1
Length of query: 1885
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1868
Effective length of database: 8,119,229
Effective search space: 15166719772
Effective search space used: 15166719772
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)