BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18725 (UTR included)
(3370 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 105 5e-22
BF01016B1E06 98 1e-19
BF01049B1F01 88 1e-16
BF14_335_C4 88 1e-16
BF14_335_C2 82 7e-15
BF14_335_C5 76 4e-13
BF01013B1H12 74 2e-12
BF01056B2D01 72 6e-12
BF01014B2F02 72 6e-12
>BF01019A1H08
Length = 504
Score = 105 bits (53), Expect = 5e-22
Identities = 89/99 (89%), Gaps = 4/99 (4%)
Strand = Plus / Plus
Query: 102 cttatcattccatggattcac-gtgcgggtgccgggtccat---gatgcagcgagaggag 157
|||| ||||| |||||||||| ||||||||||||||||||| | ||||| ||||||||
Sbjct: 376 cttagcattcaatggattcaccgtgcgggtgccgggtccatcgcgttgcagggagaggag 435
Query: 158 cttcaacagtgcctgggacttgcgacccaggggtaggtt 196
|||||||||||||||||| |||||||||||| |||||||
Sbjct: 436 cttcaacagtgcctgggagttgcgacccaggtgtaggtt 474
>BF01016B1E06
Length = 606
Score = 97.6 bits (49), Expect = 1e-19
Identities = 100/114 (87%), Gaps = 6/114 (5%)
Strand = Plus / Plus
Query: 144 tgcagcgagaggagcttcaacagtgcctgggacttgcgacccaggggtaggtt--agggc 201
||||| ||||||||||||||||||||| |||| | |||||||||| ||||||| ||||
Sbjct: 195 tgcagagagaggagcttcaacagtgccggggagtagcgacccaggtgtaggtttaagggg 254
Query: 202 ccctatctaacgcgttaaaacgctcacct---ctgtccaagctcctctctctac 252
|||||||||||||||| |||||||||||| | |||||| |||||||||||||
Sbjct: 255 ccctatctaacgcgtt-aaacgctcacctccaccgtccaatctcctctctctac 307
>BF01049B1F01
Length = 840
Score = 87.7 bits (44), Expect = 1e-16
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 144 tgcagcgagaggagcttcaacagtgcctgggacttgcgacccaggggtaggt 195
||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 590 tgcagggagaggagcttcaacagtgcctgggacttgcgacccaggtgtaggt 641
>BF14_335_C4
Length = 1491
Score = 87.7 bits (44), Expect = 1e-16
Identities = 84/94 (89%), Gaps = 5/94 (5%)
Strand = Plus / Minus
Query: 107 cattccatggattcac-gtgcgggtgccgggtccat---gatgcagcgagaggagcttca 162
|||||||||||||||| |||||| ||| ||| |||| | ||||| |||||||||||||
Sbjct: 1347 cattccatggattcaccgtgcggttgcggggaccatcgcgttgcag-gagaggagcttca 1289
Query: 163 acagtgcctgggacttgcgacccaggggtaggtt 196
|||||||||||||||||||||||||| |||||||
Sbjct: 1288 acagtgcctgggacttgcgacccaggtgtaggtt 1255
>BF14_335_C2
Length = 1827
Score = 81.8 bits (41), Expect = 7e-15
Identities = 92/106 (86%), Gaps = 6/106 (5%)
Strand = Plus / Plus
Query: 113 atggattcac-gtgcgggtgccgggtccat---gatgcagcgagaggagcttcaacagtg 168
|||||||||| ||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct: 831 atggattcaccgtgcgggtgccgggtccgccgcgttgcagggagaggagcttcaacagtg 890
Query: 169 cctgggacttgcgacccaggggtaggtt--agggcccctatctaac 212
||||||| ||||||| |||| ||||||| || |||||||||||||
Sbjct: 891 cctgggatttgcgacacaggtgtaggtttaagagcccctatctaac 936
>BF14_335_C5
Length = 1597
Score = 75.8 bits (38), Expect = 4e-13
Identities = 129/154 (83%), Gaps = 9/154 (5%)
Strand = Plus / Minus
Query: 108 attccatggattcac-gtgcgggtgccgggtccatgat-gcagcgagaggagcttcaaca 165
||||| ||||||||| ||||||||||||||| ||| | ||| ||||||||||||||||
Sbjct: 1593 attccgtggattcaccgtgcgggtgccgggtgcatctttgcacggagaggagcttcaaca 1534
Query: 166 gtgcctgggacttgcgacccaggggtaggtt--agg-gcccctatctaacgcg-ttaaaa 221
||||||||||||||||| | ||||||| ||| |||||| ||||||||| | |||
Sbjct: 1533 gtgcctgggacttgcgannnnngtgtaggtttaaggcgcccctgtctaacgcgcattaaa 1474
Query: 222 cgctcacct---ctgtccaagctcctctctctac 252
||||||||| | ||||||||||||||||||||
Sbjct: 1473 cgctcacctccaccgtccaagctcctctctctac 1440
>BF01013B1H12
Length = 817
Score = 73.8 bits (37), Expect = 2e-12
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 152 gaggagcttcaacagtgcctgggacttgcgacccaggggtaggtt 196
||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 471 gaggagcttcaacagagcctgggacttgggacccaggggtaggtt 427
>BF01056B2D01
Length = 728
Score = 71.9 bits (36), Expect = 6e-12
Identities = 66/74 (89%), Gaps = 4/74 (5%)
Strand = Plus / Plus
Query: 107 cattccatggattcac-gtgcgggtgccgggtccatga---tgcagcgagaggagcttca 162
||||||||| |||||| ||||||||||||||||||| | ||||| |||||||||||||
Sbjct: 93 cattccatgaattcaccgtgcgggtgccgggtccatcacattgcagggagaggagcttca 152
Query: 163 acagtgcctgggac 176
|||| |||||||||
Sbjct: 153 acagcgcctgggac 166
>BF01014B2F02
Length = 623
Score = 71.9 bits (36), Expect = 6e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 122 cgtgcgggtgccgggtccat-gatgcagcgagaggagcttcaacagtgcctgggacttgc 180
||||||||||||||||||| | ||||| ||||||||||||| ||| |||| ||||||||
Sbjct: 552 cgtgcgggtgccgggtccagcgttgcagggagaggagcttcagcagcgcctaggacttgc 611
Query: 181 gacccagg 188
||||||||
Sbjct: 612 gacccagg 619
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 424,420
Number of extensions: 24900
Number of successful extensions: 24900
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 24891
Number of HSP's successfully gapped: 9
Length of query: 3370
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3352
Effective length of database: 8,109,745
Effective search space: 27183865240
Effective search space used: 27183865240
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)