BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18726 (UTR included)
(1246 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 159 1e-38
BF14_335_C2 107 4e-23
BF01014B2F02 103 7e-22
BF01056B2D01 101 3e-21
BF01049B1F01 100 1e-20
BF14_335_C4 98 4e-20
BF01016A2B02 96 2e-19
BF14_335_C5 86 2e-16
BF01016B1E06 80 1e-14
BF01045B1A06 74 6e-13
>BF01019A1H08
Length = 504
Score = 159 bits (80), Expect = 1e-38
Identities = 103/110 (93%), Gaps = 3/110 (2%)
Strand = Plus / Minus
Query: 603 ttagataggagccccttaaaaccacacctgggtcgcaattcccaggcactgttgaagctc 662
|||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||
Sbjct: 492 ttagataggagccccttaaacctacacctgggtcgcaactcccaggcactgttgaagctc 433
Query: 663 ctctccctgcatc---atggacccggcacccgcacggtgaatccattgaa 709
||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 432 ctctccctgcaacgcgatggacccggcacccgcacggtgaatccattgaa 383
>BF14_335_C2
Length = 1827
Score = 107 bits (54), Expect = 4e-23
Identities = 114/132 (86%), Gaps = 4/132 (3%)
Strand = Plus / Minus
Query: 600 gagttagataggagccccttaaaaccacacctgggtcgcaattcccaggcactgttgaag 659
|||||||||||| || | ||||| | ||||||| ||||||| ||||||||||||||||||
Sbjct: 938 gagttagataggggctc-ttaaacctacacctgtgtcgcaaatcccaggcactgttgaag 880
Query: 660 ctcctctccctgcatc---atggacccggcacccgcacggtgaatccattgaacgttggg 716
|||||||||||||| | |||||||||||||||||||||||||||| ||| | | |
Sbjct: 879 ctcctctccctgcaacgcggcggacccggcacccgcacggtgaatccatagaaagctaag 820
Query: 717 aggtttcgtctc 728
||||||||||||
Sbjct: 819 aggtttcgtctc 808
>BF01014B2F02
Length = 623
Score = 103 bits (52), Expect = 7e-22
Identities = 92/104 (88%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 626 acacctgggtcgcaattcccaggcactgttgaagctcctctccctgcatca-tggacccg 684
||||||||||||||| ||| |||| ||| ||||||||||||||||||| | ||||||||
Sbjct: 622 acacctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaacgctggacccg 563
Query: 685 gcacccgcacggtgaatccattgaacgttgggaggtttcgtctc 728
|||||||||||||| ||||| |||| | || |||||||||||||
Sbjct: 562 gcacccgcacggtgcatccactgaatgctgagaggtttcgtctc 519
>BF01056B2D01
Length = 728
Score = 101 bits (51), Expect = 3e-21
Identities = 80/89 (89%), Gaps = 3/89 (3%)
Strand = Plus / Minus
Query: 642 tcccaggcactgttgaagctcctctccctgca---tcatggacccggcacccgcacggtg 698
|||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 165 tcccaggcgctgttgaagctcctctccctgcaatgtgatggacccggcacccgcacggtg 106
Query: 699 aatccattgaacgttgggaggtttcgtct 727
||| ||| ||| |||| ||||||||||||
Sbjct: 105 aattcatggaatgttgagaggtttcgtct 77
>BF01049B1F01
Length = 840
Score = 99.6 bits (50), Expect = 1e-20
Identities = 69/74 (93%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 600 gagttagataggagccccttaaaaccacacctgggtcgcaattcccaggcactgttgaag 659
|||||||||||| |||||||| | | ||||||||||||||| ||||||||||||||||||
Sbjct: 662 gagttagatagg-gccccttacacctacacctgggtcgcaagtcccaggcactgttgaag 604
Query: 660 ctcctctccctgca 673
||||||||||||||
Sbjct: 603 ctcctctccctgca 590
>BF14_335_C4
Length = 1491
Score = 97.6 bits (49), Expect = 4e-20
Identities = 103/119 (86%), Gaps = 4/119 (3%)
Strand = Plus / Plus
Query: 613 gccccttaaaaccacacctgggtcgcaattcccaggcactgttgaagctcctctccctgc 672
|||||||||| | ||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 1247 gccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctcc-tgc 1305
Query: 673 atc---atggacccggcacccgcacggtgaatccattgaacgttgggaggtttcgtctc 728
| | |||| ||| ||| ||||||||||||||||| ||| | || ||| |||||||||
Sbjct: 1306 aacgcgatggtccccgcaaccgcacggtgaatccatggaatgctgagagttttcgtctc 1364
>BF01016A2B02
Length = 780
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 599 tgagttagataggagccccttaaaaccacacctgggtcgcaattcccaggcactgttgaa 658
||||||||||||| ||| ||||| | ||||||| |||||||||||||||||||||||||
Sbjct: 301 tgagttagataggggcctcttaagcctacacctgagtcgcaattcccaggcactgttgaa 242
Query: 659 gctcctctccct 670
||||||||||||
Sbjct: 241 gctcctctccct 230
>BF14_335_C5
Length = 1597
Score = 85.7 bits (43), Expect = 2e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 635 tcgcaattcccaggcactgttgaagctcctctccctgc-atcatggacccggcacccgca 693
|||||| ||||||||||||||||||||||||||| ||| | ||| ||||||||||||||
Sbjct: 1517 tcgcaagtcccaggcactgttgaagctcctctccgtgcaaagatgcacccggcacccgca 1576
Query: 694 cggtgaatcca 704
|||||||||||
Sbjct: 1577 cggtgaatcca 1587
>BF01016B1E06
Length = 606
Score = 79.8 bits (40), Expect = 1e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 602 gttagataggagccccttaaaaccacacctgggtcgcaattcccaggcactgttgaagct 661
|||||||||| |||||||||| | ||||||||||||| | |||| |||||||||||||||
Sbjct: 265 gttagatagg-gccccttaaacctacacctgggtcgctactccccggcactgttgaagct 207
Query: 662 cctctccctgca 673
|||||| |||||
Sbjct: 206 cctctctctgca 195
>BF01045B1A06
Length = 820
Score = 73.8 bits (37), Expect = 6e-13
Identities = 60/67 (89%), Gaps = 3/67 (4%)
Strand = Plus / Minus
Query: 646 aggcactgttgaagctcctctccctgcatc---atggacccggcacccgcacggtgaatc 702
|||||||||||||||||||||||||||| | |||||||| ||||||||| ||||||||
Sbjct: 740 aggcactgttgaagctcctctccctgcaacacaatggaccccgcacccgcatggtgaatc 681
Query: 703 cattgaa 709
| |||||
Sbjct: 680 ctttgaa 674
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 164,624
Number of extensions: 3395
Number of successful extensions: 3395
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 3389
Number of HSP's successfully gapped: 10
Length of query: 1246
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1229
Effective length of database: 8,119,229
Effective search space: 9978532441
Effective search space used: 9978532441
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)