BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18752 (UTR included)
(2152 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01009B2D06 902 0.0
>BF01009B2D06
Length = 751
Score = 902 bits (455), Expect = 0.0
Identities = 455/455 (100%)
Strand = Plus / Plus
Query: 450 ttttcatgtgcaattattatttagctttacttagaagccctttttatgatgatgtcaaca 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttttcatgtgcaattattatttagctttacttagaagccctttttatgatgatgtcaaca 60
Query: 510 acagaaggagaactggatgtcgcagaattggatgaattagaagagggcgagttagaagat 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acagaaggagaactggatgtcgcagaattggatgaattagaagagggcgagttagaagat 120
Query: 570 tccgacgtagaatacggtacgtatgttccacttccgaggcctgaagccattaaacttccg 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tccgacgtagaatacggtacgtatgttccacttccgaggcctgaagccattaaacttccg 180
Query: 630 tcgctcgtaaacatgcaaattcaggacgaacagagtgatgaggattcagcccaagaatcg 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcgctcgtaaacatgcaaattcaggacgaacagagtgatgaggattcagcccaagaatcg 240
Query: 690 tcaggttcagagtcggacgatgaaccgcgaagacgtgctaaacgcactaagctgcgtccc 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcaggttcagagtcggacgatgaaccgcgaagacgtgctaaacgcactaagctgcgtccc 300
Query: 750 aagaggcctcaacagcaggcccacagtgctaaaaaagataaatataatatttggtgcaaa 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagaggcctcaacagcaggcccacagtgctaaaaaagataaatataatatttggtgcaaa 360
Query: 810 gcattggaggaagatattttaacagaagatatggttagctgtgatgtgtcaaagaaaagt 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcattggaggaagatattttaacagaagatatggttagctgtgatgtgtcaaagaaaagt 420
Query: 870 agatatggcgttgaatcttatgattacactattag 904
|||||||||||||||||||||||||||||||||||
Sbjct: 421 agatatggcgttgaatcttatgattacactattag 455
Score = 448 bits (226), Expect = e-125
Identities = 235/239 (98%)
Strand = Plus / Plus
Query: 902 tagcaataaggaacactctacaaataaaagaagttactctgaccgttcaaatgttaaact 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tagcaataaggaacactctacaaataaaagaagttactctgaccgttcaaatgttaaact 572
Query: 962 aaggcttggaaaaagaacaaacagtgaacagccatcagagagtaaacaaaatccaagaaa 1021
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 573 aaggcttggaaaaagaacaaacagtgaacaaccatcagagagtaaacaaaatccaagaaa 632
Query: 1022 cttgatagatttgtgtgtgacctcagaacatcctatagagcaaattgctcaagatatagc 1081
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 633 cttgatagatttgtgtgtgacctcagaacatcctatagagcnnnttgctcaagatatagc 692
Query: 1082 agagaaattgtcagaagaaaaaactgaattagtcggtaggatagtggcagtgcttggtg 1140
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 agagaaattgtcagaagaaaaaactgaattagtcggtaggatagtggcagtgcttggtg 751
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 292,934
Number of extensions: 5917
Number of successful extensions: 5917
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5917
Number of HSP's successfully gapped: 2
Length of query: 2152
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2135
Effective length of database: 8,119,229
Effective search space: 17334553915
Effective search space used: 17334553915
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)