BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18758 (UTR included)
(2347 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01009A1D02 898 0.0
>BF01009A1D02
Length = 803
Score = 898 bits (453), Expect = 0.0
Identities = 459/461 (99%)
Strand = Plus / Plus
Query: 1376 agcggagctgttgcagaggctgaagaataagggaaccaagaacccagactacacgagatc 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcggagctgttgcagaggctgaagaataagggaaccaagaacccagactacacgagatc 60
Query: 1436 tttgattaaagagaaactatcagaggactacgacagcgagatagcgacgacatccctccg 1495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttgattaaagagaaactatcagaggactacgacagcgagatagcgacgacatccctccg 120
Query: 1496 cgtgtccttaatgtgtccgctgggaaagatgcgtatgtcgtgtccgtgtcgaccagcgaa 1555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgtgtccttaatgtgtccgctgggaaagatgcgtatgtcgtgtccgtgtcgaccagcgaa 180
Query: 1556 ctgtccacacctgcagtgcttcgacgcctcactcttccttcagatgaacgaacggaaacc 1615
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctgtccacacctgcagtgctttgacgcctcactcttccttcagatgaacgaacggaaacc 240
Query: 1616 cacgtggctctgtcccgtctgtgacagaccggcgccttacgactctctagtcgttgatgg 1675
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 241 cacgtggctctgtcccgtctgtgacagaccggcgccttacgactctctggtcgttgatgg 300
Query: 1676 gtacttccaagaggttctaacgtcgcctcgcctggccagcgagtgtaacgagatccagct 1735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtacttccaagaggttctaacgtcgcctcgcctggccagcgagtgtaacgagatccagct 360
Query: 1736 tcacgcggacggcagctggtccgcccacgcgcccccgccccgcgccccgccgcccgccgc 1795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcacgcggacggcagctggtccgcccacgcgcccccgccccgcgccccgccgcccgccgc 420
Query: 1796 gcccgccgccgagcccgtcactctcatatccgacgaccttg 1836
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcccgccgccgagcccgtcactctcatatccgacgaccttg 461
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 195,794
Number of extensions: 3510
Number of successful extensions: 3510
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3510
Number of HSP's successfully gapped: 1
Length of query: 2347
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2330
Effective length of database: 8,119,229
Effective search space: 18917803570
Effective search space used: 18917803570
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)