BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18767 (UTR included)
(1975 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022A1H09 1318 0.0
>BF01022A1H09
Length = 694
Score = 1318 bits (665), Expect = 0.0
Identities = 683/689 (99%)
Strand = Plus / Plus
Query: 888 cttgatttgataccactattcggtacattcctaagctgtctagtgtttggtgttgagttg 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttgatttgataccactattcggtacattcctaagctgtctagtgtttggtgttgagttg 60
Query: 948 ggtttgggctgtggagtcgtgattgacgttctgcttctattgtactacaattcaagaccg 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggtttgggctgtggagtcgtgattgacgttctgcttctattgtactacaattcaagaccg 120
Query: 1008 cagttaaatattaaatttgtcaatgacgacaatcttccaccccattactccgtagaacca 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagttaaatattaaatttgtcaatgacgacaatcttccaccccattactccgtagaacca 180
Query: 1068 gtaggtagtttgaatttcgctagtgctgagaaggttcgtttaacattgaccgctttaaag 1127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtaggtagtttgaatttcgctagtgctgagaaggttcgtttaacattgaccgctttaaag 240
Query: 1128 aaatcgaacgaactgactgatatccggctagataataatttacgagttataaacgatggg 1187
|||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 241 aaatcgaacgaactaactgatatcaggctagataataatttacgagttataaacgatggg 300
Query: 1188 gtcagcaatacaagtgaatcaagaccgcgggctggtaatgtattggtggtacattgtaat 1247
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 301 gtcagcaatacaagtgaatcaagaccgcgggctggtaatatattggtggtacattgtaat 360
Query: 1248 tcactggtcagactggactacacatttttacagagcctcagtatgctggtaagcgaatgg 1307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcactggtcagactggactacacatttttacagagcctcagtatgctggtaagcgaatgg 420
Query: 1308 tctctccatggtcacatagtatggtgtgacgccagcccgcgtatacaagaacagcttaat 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tctctccatggtcacatagtatggtgtgacgccagcccgcgtatacaagaacagcttaat 480
Query: 1368 agcgtgttacatgacgtcaaattctgtgatattcagtcactatctgtggtactgttagat 1427
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 481 agcgtgttacatgacgtcaaattctgtgatattcagtcattatctgtggtactgttagat 540
Query: 1428 ttaacaatggcagcacaaacaggtcattccagtgatacaagactttaatttgttttttat 1487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttaacaatggcagcacaaacaggtcattccagtgatacaagactttaatttgttttttat 600
Query: 1488 tatttatttgatacttatataatattttttttattattgacttggaagttttaccttaag 1547
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 601 tatttatttgatacttatataatattttttttatcattgacttggaagttttaccttaag 660
Query: 1548 atgtaaatattaaagtgtttaattaataa 1576
|||||||||||||||||||||||| ||||
Sbjct: 661 atgtaaatattaaagtgtttaatttataa 689
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 283,802
Number of extensions: 6558
Number of successful extensions: 6558
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6557
Number of HSP's successfully gapped: 1
Length of query: 1975
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1958
Effective length of database: 8,119,229
Effective search space: 15897450382
Effective search space used: 15897450382
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)