BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18768 (UTR included)
(2993 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01045A2D11 1572 0.0
BF14_335_C2 111 7e-24
BF01031B2E06 80 2e-14
>BF01045A2D11
Length = 829
Score = 1572 bits (793), Expect = 0.0
Identities = 820/829 (98%)
Strand = Plus / Plus
Query: 1734 caggcagcttggattgtggagtcggatgctgaaggtgataactctgaagaagccagtgat 1793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caggcagcttggattgtggagtcggatgctgaaggtgataactctgaagaagccagtgat 60
Query: 1794 gaagatgatgatgatgatgataatgaaaatgatgaatttatgtcatgcgaggaagatgag 1853
|||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 61 gaagatgatgatgacgatgataatgaaaatgatcaatttatgtcatgcgaggaagatgag 120
Query: 1854 tctgataaagaagttaatgaggagatcaatgactttgaatctgtcatggaatcagaagta 1913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctgataaagaagttaatgaggagatcaatgactttgaatctgtcatggaatcagaagta 180
Query: 1914 ggacccacggatgaaagatatgatgcaactattgatgcccatgaagagcatgagatgttg 1973
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 181 ggacccacggatgaaagatatgatgcaactattgatgcccacgaagagcatgagatgttg 240
Query: 1974 aaaaagttggcagcagctaaggaagatcaacaatttccagatgaagtagatactccacaa 2033
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaaaagttagcagcagctaaggaagatcaacaatttccagatgaagtagatactccacaa 300
Query: 2034 gatgtaccagcaagggagagatttgtcagatatagaggtcttgaatcatttaggacatct 2093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatgtaccagcaagggagagatttgtcagatatagaggtcttgaatcatttaggacatct 360
Query: 2094 ccatgggaccctaaggaaaatcttccacaggattatgctaggatcttccaatttgaaaac 2153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccatgggaccctaaggaaaatcttccacaggattatgctaggatcttccaatttgaaaac 420
Query: 2154 tatgacagaacaagaagaagggtatttaaagaacttgaagacagccttgaaaatatgtat 2213
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 421 tatgacagaacaagaagaagggtatttaaagaacttgaagacagcctcgaaaatatgtat 480
Query: 2214 ggattgaacataacaattcatgtgaaaggtgttaggcaagatttatggaaggcattccac 2273
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggattctacataacaattcatgtgaaaggtgttaggcaagatttatggaaggcattccac 540
Query: 2274 gaatccaatggcaacactccactatcagtatttggcctgctgccgcatgaacataagatg 2333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatccaatggcaacactccactatcagtatttggcctgctgccgcatgaacataagatg 600
Query: 2334 tcattaatgaatgttgttctgaagcgcaccggtgtcagcgaggatcctattaaaagcaaa 2393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcattaatgaatgttgttctgaagcgcaccggtgtcagcgaggatcctattaaaagcaaa 660
Query: 2394 gagaggctcatcttccaagtcggatacaggagattcattgtcaatccaatatttagccaa 2453
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 661 gagaggctcatcttccaagtcgggtacaggagattcattgtcaatccaatatttagccaa 720
Query: 2454 cacacgaacgggtccaaacacaaatacgagagattcttccaaccaggttcgacgtgtgtc 2513
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 721 cacacgaacgggtccaaacacaagtacgagagattcttccaaccaggttcgacgtgtgtc 780
Query: 2514 gctacatttttcgcccctattcagtttagtccatcaacagttttgtgtt 2562
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gctacatttttcgcccctattcagtttagtccatcaacagttttgtgtt 829
>BF14_335_C2
Length = 1827
Score = 111 bits (56), Expect = 7e-24
Identities = 130/154 (84%), Gaps = 3/154 (1%)
Strand = Plus / Minus
Query: 2840 gagaggtataatggctagatctctccacaacctacttaatgactagggcacgtccagaat 2899
||||||||||| |||| ||||||| ||| |||||| || ||| |||| ||||||||
Sbjct: 1107 gagaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaac 1048
Query: 2900 taacatcagttaattcttgcaacgtacttcgaaggcagccctagtaggttcgtttcaaat 2959
||||| ||||| |||||| |||||||||||||| |||| ||||||||||||||||||||
Sbjct: 1047 taacaccagttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaaat 988
Query: 2960 ttgttaagatagagagtggagcttggacggtgga 2993
||| | || ||||| |||||||||||||||||
Sbjct: 987 ttggttag---gagagaggagcttggacggtgga 957
>BF01031B2E06
Length = 707
Score = 79.8 bits (40), Expect = 2e-14
Identities = 83/96 (86%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 2781 tattacgaa-ctcactaagaatattttcgtcttaaatttgtacgcggtagaagttggagc 2839
||||||||| ||||||||||||| ||||| ||||||||||||||||||||| |||||
Sbjct: 478 tattacgaagctcactaagaataggttcgtggcaaatttgtacgcggtagaagtgggagc 537
Query: 2840 gagaggtataatggctagatctctccacaacctact 2875
||| | | ||| |||| ||||||||||||||||||
Sbjct: 538 gagcgttgtaaaagctaaatctctccacaacctact 573
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 300,182
Number of extensions: 5064
Number of successful extensions: 5064
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5062
Number of HSP's successfully gapped: 3
Length of query: 2993
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2975
Effective length of database: 8,109,745
Effective search space: 24126491375
Effective search space used: 24126491375
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)