BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18769 (UTR included)
(2431 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_867_C1 1721 0.0
>BF14_867_C1
Length = 903
Score = 1721 bits (868), Expect = 0.0
Identities = 894/903 (99%)
Strand = Plus / Plus
Query: 716 tcgaggaacacttatggagctgggtatttcccccatcgtcacatcaggactgatcatgca 775
||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 1 tcgaggaacacttatggagcttggtatttcccccctcgtcacatcaggactgatcatgca 60
Query: 776 actgctagctggagctaagattatagaagtcggtgacactcccaaagatagggccttgtt 835
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 61 actgctagctggagctaagattatagaagtcggtcacactcccaaagatagggccttgtt 120
Query: 836 taatggggcgcagaaactattcggcatggtgataacagtgggacaggccatagtgtatgt 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taatggggcgcagaaactattcggcatggtgataacagtgggacaggccatagtgtatgt 180
Query: 896 catgacgggaatgtacggtgaacctagtgagattggtgccggagtctgtctgctcatcat 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catgacgggaatgtacggtgaacctagtgagattggtgccggagtctgtctgctcatcat 240
Query: 956 catacagttgtttgtggccggacttattgtactgctgctcgatgaattacttcagaaagg 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catacagttgtttgtggccggacttattgtactgctgctcgatgaattacttcagaaagg 300
Query: 1016 ttatggtcttggctccggtatttccctcttcattgccaccaacatttgtgaaacaatcgt 1075
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 301 ttatggtcttggctccggtatttccctcttcatcgccaccaacatttgtgaaacaatcgt 360
Query: 1076 atggaaggctttctcaccggctaccgtcaacactggtcgcggtacagagtttgaaggcgc 1135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atggaaggctttctcaccggctaccgtcaacactggtcgcggtacagagtttgaaggcgc 420
Query: 1136 agtgatagcattattccacttgctggccactagacccgataaagtccgagcactcagaga 1195
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 421 agtgatagcattattccacttgctggctactagacccgataaagtccgagcactcagaga 480
Query: 1196 agccttctaccgtcagaatctaccaaatttgatgaacctcctagcgacagtcctagtgtt 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agccttctaccgtcagaatctaccaaatttgatgaacctcctagcgacagtcctagtgtt 540
Query: 1256 tgctatcgtgatatacttccagggcttcagagtggatctccccatcaagtcggctcgtta 1315
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 541 tgctatcgtgatatacttccagggcttcagggtggatctccccatcaagtcggctcgtta 600
Query: 1316 ccgcggccagcactcttcgtaccccatcaaactgttctacacctcaaacattccaatcat 1375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccgcggccagcactcttcgtaccccatcaaactgttctacacctcaaacattccaatcat 660
Query: 1376 tcttcaatccgccctcgtctccaatctgtatgttatctctcagatgttagctgtgaagtt 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tcttcaatccgccctcgtctccaatctgtatgttatctctcagatgttagctgtgaagtt 720
Query: 1436 cagcggcaacttcctggtgaacttacttggtgtgtgggcagacgtgggcggtggtggccc 1495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cagcggcaacttcctggtgaacttacttggtgtgtgggcagacgtgggcggtggtggccc 780
Query: 1496 cgcccgcgcctatcccgtgggcggtctgtgctactacttcagccccccggagtcgctcgc 1555
|||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 781 cgcccgtgcctatcccgtgggcggtctgtgctactacttcagcccgccggantcgctcgc 840
Query: 1556 ccacatcgctcacgacccgcttcacgccgtcatgtacatcatcttcatgttgggctcctg 1615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ccacatcgctcacgacccgcttcacgccgtcatgtacatcatcttcatgttgggctcctg 900
Query: 1616 cgc 1618
|||
Sbjct: 901 cgc 903
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 303,434
Number of extensions: 6544
Number of successful extensions: 6544
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6544
Number of HSP's successfully gapped: 1
Length of query: 2431
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2414
Effective length of database: 8,119,229
Effective search space: 19599818806
Effective search space used: 19599818806
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)