BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18777 (UTR included)
(2746 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01045A2E04 1532 0.0
BF14_1097_C1 844 0.0
BF01012A1D08 432 e-120
>BF01045A2E04
Length = 800
Score = 1532 bits (773), Expect = 0.0
Identities = 785/789 (99%)
Strand = Plus / Plus
Query: 652 aacaatctagccttccatttaactattttagagatactgattataaagaaagaaataatc 711
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 aacaatctagccttccatttaactattttagagatactgattataaagaaagaaataatg 71
Query: 712 taaggttaaaaattataccaagcttaagagaacgttttaaaaaatatcagagtcataact 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 taaggttaaaaattataccaagcttaagagaacgttttaaaaaatatcagagtcataact 131
Query: 772 tctctagtataccctatttagaacttaacaagtctatatttgagaaacaactagatgtat 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tctctagtataccctatttagaacttaacaagtctatatttgagaaacaactagatgtat 191
Query: 832 tgaaccaaaaatcccttgaaactatagatgacgaggtaaatcattatcattgctatggat 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tgaaccaaaaatcccttgaaactatagatgacgaggtaaatcattatcattgctatggat 251
Query: 892 acgctagtgatgatagtattgctgaaaccacaattcacgtagacatagacaaatcaatgc 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 acgctagtgatgatagtattgctgaaaccacaattcacgtagacatagacaaatcaatgc 311
Query: 952 gagataataaacatgatcacaatactcccgaagaattgaattcattcaatgtagaccttc 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gagataataaacatgatcacaatactcccgaagaattgaattcattcaatgtagaccttc 371
Query: 1012 ccaaacacggcatccgtaatttatatgcaaacaaagaacgaaaaaaagatttgttcttga 1071
||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 372 ccaaacatggcatccgtaatttatatgcaaacaaagaacgaaaaaaagatctgttcttaa 431
Query: 1072 actttagatcatataataagcaaaggggttatcatttaatgcctttacatgatacaaaaa 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 actttagatcatataataagcaaaggggttatcatttaatgcctttacatgatacaaaaa 491
Query: 1132 ttgataattatcacgacgataaagaatatttagagcgtgaaacgaaaagaattggacatg 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ttgataattatcacgacgataaagaatatttagagcgtgaaacgaaaagaattggacatg 551
Query: 1192 ttgataaatttaaaagccacaaaattcgtaaggttaatttaaattcttcagtaagtgaac 1251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ttgataaatttaaaagccacaaaattcgtaaggttaatttaaattcttcagtaagtgaac 611
Query: 1252 gaagtcctgtcatctcatacaagacagatgttggtaatccatttaaaaatatcggatcag 1311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gaagtcctgtcatctcatacaagacagatgttggtaatccatttaaaaatatcggatcag 671
Query: 1312 accataccaaggctaaaacaaaaacttatagccattataaattagaaaaggataataatg 1371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 accataccaaggctaaaacaaaaacttatagccattataaattagaaaaggataataatg 731
Query: 1372 aacaatgtcaaatcgaggtcgtcccccgttcaataccaaaaaatagacgtgaaatagagt 1431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 aacaatgtcaaatcgaggtcgtcccccgttcaataccaaaaaatagacgtgaaatagagt 791
Query: 1432 catatcaca 1440
|||||||||
Sbjct: 792 catatcaca 800
>BF14_1097_C1
Length = 930
Score = 844 bits (426), Expect = 0.0
Identities = 426/426 (100%)
Strand = Plus / Plus
Query: 1784 cagtaatgattacggaggacgtgaaaatggccggaataacaatcagacacagccgttaga 1843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 cagtaatgattacggaggacgtgaaaatggccggaataacaatcagacacagccgttaga 108
Query: 1844 gaggcgcgagtctcgacggggtcagtttactcgcagcctaagtaatgccgacgtgcctcc 1903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 gaggcgcgagtctcgacggggtcagtttactcgcagcctaagtaatgccgacgtgcctcc 168
Query: 1904 cgatgaaaaagcagacggcagtctgagtgacactgcgataggcggaaccacagaaataga 1963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 cgatgaaaaagcagacggcagtctgagtgacactgcgataggcggaaccacagaaataga 228
Query: 1964 gccagctagtgatgacgcacttcttaaagctgaaccaagagattacttcggcccaggaat 2023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gccagctagtgatgacgcacttcttaaagctgaaccaagagattacttcggcccaggaat 288
Query: 2024 gggaaagaagagtaattccacctctcaactatcagctacaggacgaaaaagaaggttagg 2083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gggaaagaagagtaattccacctctcaactatcagctacaggacgaaaaagaaggttagg 348
Query: 2084 tttcggtaaacgtggaaaaaattcgtttacggtccaacgcagcgaagaagtggtgcccgg 2143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tttcggtaaacgtggaaaaaattcgtttacggtccaacgcagcgaagaagtggtgcccgg 408
Query: 2144 tgaaatgagaggtggggcgggagtgtcccgggcctcctccgcctcgagcgagaatgacga 2203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tgaaatgagaggtggggcgggagtgtcccgggcctcctccgcctcgagcgagaatgacga 468
Query: 2204 cgacag 2209
||||||
Sbjct: 469 cgacag 474
Score = 101 bits (51), Expect = 6e-21
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 221 cagcgctttcagcacgcagtccgaacgaccgcgaccaaccaggatgctcag 271
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagcgctttcagcacgcagtccgaacgaccgcgaccaaccaggatgctcag 51
>BF01012A1D08
Length = 808
Score = 432 bits (218), Expect = e-120
Identities = 221/222 (99%)
Strand = Plus / Plus
Query: 1843 agaggcgcgagtctcgacggggtcagtttactcgcagcctaagtaatgccgacgtgcctc 1902
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaggcgcgtgtctcgacggggtcagtttactcgcagcctaagtaatgccgacgtgcctc 60
Query: 1903 ccgatgaaaaagcagacggcagtctgagtgacactgcgataggcggaaccacagaaatag 1962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccgatgaaaaagcagacggcagtctgagtgacactgcgataggcggaaccacagaaatag 120
Query: 1963 agccagctagtgatgacgcacttcttaaagctgaaccaagagattacttcggcccaggaa 2022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agccagctagtgatgacgcacttcttaaagctgaaccaagagattacttcggcccaggaa 180
Query: 2023 tgggaaagaagagtaattccacctctcaactatcagctacag 2064
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgggaaagaagagtaattccacctctcaactatcagctacag 222
Score = 129 bits (65), Expect = 3e-29
Identities = 65/65 (100%)
Strand = Plus / Plus
Query: 2682 agagggcgggggcggcgcgcgtcgcaagcgctccgggcccgctgccacgtccttccagcg 2741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 agagggcgggggcggcgcgcgtcgcaagcgctccgggcccgctgccacgtccttccagcg 280
Query: 2742 ctcgc 2746
|||||
Sbjct: 281 ctcgc 285
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 273,668
Number of extensions: 5018
Number of successful extensions: 5018
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5018
Number of HSP's successfully gapped: 5
Length of query: 2746
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2729
Effective length of database: 8,119,229
Effective search space: 22157375941
Effective search space used: 22157375941
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)