BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18780 (UTR included)
(979 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01024A2D06 620 e-178
BF01047A1C05 549 e-156
>BF01024A2D06
Length = 708
Score = 620 bits (313), Expect = e-178
Identities = 319/321 (99%)
Strand = Plus / Plus
Query: 503 gcaaggcccagcagtttttatggacatatcgctagaagatcaggctttagaactcagaaa 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 gcaaggcccagcagtttttatggacatatcgctagaagatcaggctttagaactcagaaa 111
Query: 563 gtatttcaaaagcctcggtgctgaaatttctgaagaaaaatctcctaagggtattgaaga 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 gtatttcaaaagcctcggtgctgaaatttctgaagaaaaatctcctaagggtattgaaga 171
Query: 623 cgatcttcataaaatagtaggagtttgtgatgcatgttttaaagaaaacaatgaagctga 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 cgatcttcataaaatagtaggagtttgtgatgcatgttttaaagaaaacaatgaagctga 231
Query: 683 tatcgaggccatactgaacagtatagtgtccatcatggtgtccatacctcttgagagagg 742
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 232 tattgaggccatactgaacagtatagtgtccatcatggtgtctatacctcttgagagagg 291
Query: 743 ggaaaatcttatcctggcgttcagtcagagactcactaagtcccctggacctaagctggg 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ggaaaatcttatcctggcgttcagtcagagactcactaagtcccctggacctaagctggg 351
Query: 803 catggtcgctctacaatcgtt 823
|||||||||||||||||||||
Sbjct: 352 catggtcgctctacaatcgtt 372
>BF01047A1C05
Length = 442
Score = 549 bits (277), Expect = e-156
Identities = 331/349 (94%), Gaps = 2/349 (0%)
Strand = Plus / Plus
Query: 477 attataaagttataacaattaaaaatgcaaggcccagcagtttttatggacatatcgcta 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attataaagttataacaattaaaaatgcaaggcccagcagtttttatggacatatcgcta 60
Query: 537 gaagatcag-gctttagaactcagaaagtatttcaaaagcctcggtgctgaaatttctga 595
||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 61 gaagatcagagctttagaactcnnaaagtatttcaaaagccttggtgctgaaatttctga 120
Query: 596 agaaaaatctcctaagggtattgaagacgatcttcataaaatagtaggagtttgtgatgc 655
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaaaaatctcctaagggtgttgaagacgatcttcataaaatagtaggagtttgtgatgc 180
Query: 656 atgttttaaagaaaacaatgaagctgatatcgaggccatactgaacag-tatagtgtcca 714
||||||||||||||| |||||||||||||| |||||| ||||||||| | ||||||
Sbjct: 181 atgttttaaagaaaataatgaagctgatattgaggccnnactgaacagcnannntgtcca 240
Query: 715 tcatggtgtccatacctcttgagagaggggaaaatcttatcctggcgttcagtcagagac 774
||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 241 tcatggtgtccatacctcttgagagaggggaaaatcttatcctggagttcagtcgcagac 300
Query: 775 tcactaagtcccctggacctaagctgggcatggtcgctctacaatcgtt 823
||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 301 tcactaagtcccctggaccgaagctgggcatggtcgctctacaatcgtt 349
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 179,619
Number of extensions: 17194
Number of successful extensions: 17194
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 17192
Number of HSP's successfully gapped: 2
Length of query: 979
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 962
Effective length of database: 8,119,229
Effective search space: 7810698298
Effective search space used: 7810698298
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)