BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18783 (UTR included)
(1882 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01005A2A11 737 0.0
>BF01005A2A11
Length = 621
Score = 737 bits (372), Expect = 0.0
Identities = 378/380 (99%)
Strand = Plus / Plus
Query: 453 gttatttttttcaggcgatggtatccaaatgaatcgttggaagttaatatgcctagtgtt 512
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gttattttttttaggcgatggtatccaaatgaatcgttggaagttaatatgcctagtgtt 301
Query: 513 aaaagtttaactaaagttaaaaacgaacctgggaaacgtggagtgagacggatagcaatg 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aaaagtttaactaaagttaaaaacgaacctgggaaacgtggagtgagacggatagcaatg 361
Query: 573 cttaataaattgtttatgaaaaatattacggatattttatccacaggcacagtgtcttta 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cttaataaattgtttatgaaaaatattacggatattttatccacaggcacagtgtcttta 421
Query: 633 aaagtagtcggacaaggaatagaaatatcaaaggtgaaaataatgccaaatctccaatca 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aaagtagtcggacaaggaatagaaatatcaaaggtgaaaataatgccaaatctccaatca 481
Query: 693 ataaatgttttctgggtgtgtaagggtgatgcttcagatgtacaaacagaagccctgctc 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ataaatgttttctgggtgtgtaagggtgatgcttcagatgtacaaacagaagccctgctc 541
Query: 753 cattccattgcaggtcctctccgacatgagttgtcaacactgaggttgatgggagaggtg 812
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 cattccattgcgggtcctctccgacatgagttgtcaacactgaggttgatgggagaggtg 601
Query: 813 ccatacattttttttgttaa 832
||||||||||||||||||||
Sbjct: 602 ccatacattttttttgttaa 621
Score = 434 bits (219), Expect = e-121
Identities = 238/244 (97%), Gaps = 4/244 (1%)
Strand = Plus / Plus
Query: 143 ttattttgttcaagtgcatataaaatattatatgtatatatacgaataattctttttttg 202
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4 ttattttgttcaagtgcatataaaatcttatatgtatatatacgaataattctttttttg 63
Query: 203 gcagcccaatattatataagcttcagctcatagaatgtgacataagctaaaaaaattact 262
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 64 gcagcccaatattatataagcttcatctcatagaatgtgacataagctaaaaaaattac- 122
Query: 263 tacttacattacaataaagacacaaaaatgttgcggcgattctatcatagtacctgtgtg 322
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ---ttacattacaataaagacacaaaaatgttgcggcgattctatcatagtacctgtgtg 179
Query: 323 ttaaataatttaaaaaagcaaggccttaaactttctaaaatgttaaaccctaaaagtaaa 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ttaaataatttaaaaaagcaaggccttaaactttctaaaatgttaaaccctaaaagtaaa 239
Query: 383 aagt 386
||||
Sbjct: 240 aagt 243
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 333,068
Number of extensions: 8724
Number of successful extensions: 8724
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8723
Number of HSP's successfully gapped: 2
Length of query: 1882
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1865
Effective length of database: 8,119,229
Effective search space: 15142362085
Effective search space used: 15142362085
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)