BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18789 (UTR included)
(1252 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3358_C1 561 e-160
BF01019A1H08 147 5e-35
BF14_335_C4 123 7e-28
BF14_335_C2 109 1e-23
BF01044B1A07 96 2e-19
BF14_335_C5 96 2e-19
BF01056B2D01 94 6e-19
BF01049B1F01 92 3e-18
BF01014B2F02 88 4e-17
BF01016A2B02 84 6e-16
BF01045B1A06 82 2e-15
BF01043B1E03 74 6e-13
BF14_2255_C1 70 9e-12
>BF14_3358_C1
Length = 1430
Score = 561 bits (283), Expect = e-160
Identities = 289/291 (99%)
Strand = Plus / Plus
Query: 307 gaccggcgcgcgggaacaacgtgtcgcttaataaaacacgtttaaaattatttaaccgtc 366
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 25 gaccggcgcgcgggaacaacgtgtcgcttaataaaacacgtttgaaattatttaaccgtc 84
Query: 367 ttaagaaacttgtttgcattaaatatcaaaatgaactgtcgtttatgtaacagtgatggg 426
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 ttaataaacttgtttgcattaaatatcaaaatgaactgtcgtttatgtaacagtgatggg 144
Query: 427 tgaaaattgtgataatgaaacatattatgttataatatattgattcatctgtttttgtac 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tgaaaattgtgataatgaaacatattatgttataatatattgattcatctgtttttgtac 204
Query: 487 tgtttgataacaatatgaggagcgatctgatgtcgccaagtgagctggaggggacggatt 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tgtttgataacaatatgaggagcgatctgatgtcgccaagtgagctggaggggacggatt 264
Query: 547 acctcctctcatcaaccatgaggctggaggacagcttcctacaaatacttg 597
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acctcctctcatcaaccatgaggctggaggacagcttcctacaaatacttg 315
>BF01019A1H08
Length = 504
Score = 147 bits (74), Expect = 5e-35
Identities = 104/114 (91%)
Strand = Plus / Minus
Query: 615 ttagaaaggggccccttaaagctataccagggtcgcaagttccaggcactgttgaagctc 674
||||| ||| |||||||||| ||| ||| ||||||||| | |||||||||||||||||||
Sbjct: 492 ttagataggagccccttaaacctacacctgggtcgcaactcccaggcactgttgaagctc 433
Query: 675 ctctccctgcaacgcgatggacccggcacccgtacggtgaatccaaggaatgct 728
|||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 432 ctctccctgcaacgcgatggacccggcacccgcacggtgaatccattgaatgct 379
>BF14_335_C4
Length = 1491
Score = 123 bits (62), Expect = 7e-28
Identities = 96/106 (90%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 624 ggccccttaaagctataccagggtcgcaagttccaggcactgttgaagctcctctccctg 683
||||||||||| ||| ||| ||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 1246 ggccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctct-cctg 1304
Query: 684 caacgcgatggacccggcacccgtacggtgaatccaaggaatgctg 729
||||||||||| ||| ||| ||| |||||||||||| |||||||||
Sbjct: 1305 caacgcgatggtccccgcaaccgcacggtgaatccatggaatgctg 1350
>BF14_335_C2
Length = 1827
Score = 109 bits (55), Expect = 1e-23
Identities = 82/91 (90%)
Strand = Plus / Minus
Query: 629 cttaaagctataccagggtcgcaagttccaggcactgttgaagctcctctccctgcaacg 688
|||||| ||| ||| | ||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 922 cttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacg 863
Query: 689 cgatggacccggcacccgtacggtgaatcca 719
|| |||||||||||||| ||||||||||||
Sbjct: 862 cggcggacccggcacccgcacggtgaatcca 832
>BF01044B1A07
Length = 806
Score = 95.6 bits (48), Expect = 2e-19
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 647 tcgcaagttccaggcactgttgaagctcctctccctgcaacgcgatggacccggcacccg 706
|||| ||| |||| ||| |||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 523 tcgcgagtcccagacacagttgaagctcctctccctgccacgcgatggacccgccacccg 464
Query: 707 tacggtgaatccaaggaatgctgtgaagtttc 738
|||||||||||| ||| |||| ||||||||
Sbjct: 463 cacggtgaatccattgaacgctgagaagtttc 432
>BF14_335_C5
Length = 1597
Score = 95.6 bits (48), Expect = 2e-19
Identities = 97/114 (85%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 612 gcgttagaaaggggccccttaaagctataccagggtcgcaagttccaggcactgttgaag 671
|||||||| |||||| ||||||| ||| || |||||||| ||||||||||||||||
Sbjct: 1482 gcgttagacaggggcgccttaaacctacacnnnnntcgcaagtcccaggcactgttgaag 1541
Query: 672 ctcctctccctgcaacgcgatggacccggcacccgtacggtgaatccaaggaat 725
||||||||| ||||| |||| |||||||||||| |||||||||||| |||||
Sbjct: 1542 ctcctctccgtgcaa--agatgcacccggcacccgcacggtgaatccacggaat 1593
>BF01056B2D01
Length = 728
Score = 93.7 bits (47), Expect = 6e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 656 ccaggcactgttgaagctcctctccctgcaacgcgatggacccggcacccgtacggtgaa 715
|||||| |||||||||||||||||||||||| | ||||||||||||||||| ||||||||
Sbjct: 163 ccaggcgctgttgaagctcctctccctgcaatgtgatggacccggcacccgcacggtgaa 104
Query: 716 tccaaggaatg 726
| || ||||||
Sbjct: 103 ttcatggaatg 93
>BF01049B1F01
Length = 840
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 623 gggccccttaaagctataccagggtcgcaagttccaggcactgttgaagctcctctccct 682
|||||||||| | ||| ||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 652 gggccccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccct 593
Query: 683 gcaacg 688
||||||
Sbjct: 592 gcaacg 587
>BF01014B2F02
Length = 623
Score = 87.7 bits (44), Expect = 4e-17
Identities = 83/95 (87%), Gaps = 2/95 (2%)
Strand = Plus / Minus
Query: 644 gggtcgcaagttccaggcactgttgaagctcctctccctgcaacgcgatggacccggcac 703
||||||||||| | |||| ||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 616 gggtcgcaagtcctaggcgctgctgaagctcctctccctgcaacgc--tggacccggcac 559
Query: 704 ccgtacggtgaatccaaggaatgctgtgaagtttc 738
||| |||||| ||||| |||||||| || |||||
Sbjct: 558 ccgcacggtgcatccactgaatgctgagaggtttc 524
>BF01016A2B02
Length = 780
Score = 83.8 bits (42), Expect = 6e-16
Identities = 78/90 (86%)
Strand = Plus / Minus
Query: 614 gttagaaaggggccccttaaagctataccagggtcgcaagttccaggcactgttgaagct 673
|||||| ||||||| ||||| ||| ||| | ||||||| | ||||||||||||||||||
Sbjct: 298 gttagataggggcctcttaagcctacacctgagtcgcaattcccaggcactgttgaagct 239
Query: 674 cctctccctgcaacgcgatggacccggcac 703
||||||||| ||||||| |||||||||||
Sbjct: 238 cctctcccttcaacgcgcgggacccggcac 209
>BF01045B1A06
Length = 820
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 658 aggcactgttgaagctcctctccctgcaacgcgatggacccggcacccgtacggtgaatc 717
|||||||||||||||||||||||||||||| | |||||||| ||||||| | ||||||||
Sbjct: 740 aggcactgttgaagctcctctccctgcaacacaatggaccccgcacccgcatggtgaatc 681
Query: 718 c 718
|
Sbjct: 680 c 680
>BF01043B1E03
Length = 830
Score = 73.8 bits (37), Expect = 6e-13
Identities = 91/108 (84%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 612 gcgttagaaaggggccccttaaagctataccagggtcgcaagttccaggcactgttgaag 671
|||||||| |||||||| ||||| ||||||| |||| |||||| ||| ||||| ||| |
Sbjct: 378 gcgttagataggggccctttaaacctatacctgggttgcaagtcccaagcactattggac 437
Query: 672 ctcctctccctgcaacgcgatggacccggcacccgtacggtgaatcca 719
|||||||||| |||||| ||||||||| |||| | || |||||||||
Sbjct: 438 ctcctctcccagcaacg--atggacccgtcacctgcactgtgaatcca 483
>BF14_2255_C1
Length = 1341
Score = 69.9 bits (35), Expect = 9e-12
Identities = 71/82 (86%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 656 ccaggcactgttgaagctcctctccctgcaacgcgatggacccggcacccgtacggtgaa 715
||||||| |||| ||| |||||||||| || ||||||||||||||||| | |||||||
Sbjct: 960 ccaggcaatgttaaaggtcctctccctaaaatgcgatggacccggcacc--tgcggtgaa 1017
Query: 716 tccaaggaatgctgtgaagttt 737
|||| ||||||||| |||||||
Sbjct: 1018 tccatggaatgctgagaagttt 1039
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 203,051
Number of extensions: 16555
Number of successful extensions: 16555
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 16551
Number of HSP's successfully gapped: 13
Length of query: 1252
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1235
Effective length of database: 8,119,229
Effective search space: 10027247815
Effective search space used: 10027247815
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)