BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18794 (UTR included)
(2051 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051A2A04 1532 0.0
>BF01051A2A04
Length = 827
Score = 1532 bits (773), Expect = 0.0
Identities = 806/817 (98%)
Strand = Plus / Plus
Query: 356 agcgcggacggtcgagggttcaaattacttaacgtatcaatttattgaattatatattta 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 agcgcggacggtcgagggttcaaattacttaacgtatcaatttattgaattatatattta 70
Query: 416 tgtgaaatcatttttttataaattataaaaaaaacaatgataaatattgcaaacagttaa 475
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tgtgaaatattttttttataaattataaaaaaaacaatgataaatattgcaaacagttaa 130
Query: 476 catacgaacgttattgaaatttaatatggataatagtgataacagctcgtcagagaggag 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 catacgaacgttattgaaatttaatatggataatagtgataacagctcgtcagagaggag 190
Query: 536 cctggagaggttgacagaaataaaagcattcattgaggctagtaagaaaactaatgaaaa 595
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 191 tctggagaggttgacagaaataaaagcattcattgaggctagtaagaaaagtaatgaaaa 250
Query: 596 agccgaagagcttcaggtcgatgctgataaaagcctgtcaaagcttaacgaagtcgtctt 655
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 agccgaggagcttcaggtcgatgctgataaaagcctgtcaaagcttaacgaagtcgtctt 310
Query: 656 tgacgatgctttcgaattaaccggtcacggcaagtttaatcacatagtgctgatgacctg 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tgacgatgctttcgaattaaccggtcacggcaagtttaatcacatagtgctgatgacctg 370
Query: 716 tggtcttattatgctgaacgtgtccatggagtccgtcggcatgagctacgtgatcacggc 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tggtcttattatgctgaacgtgtccatggagtccgtcggcatgagctacgtgatcacggc 430
Query: 776 agctgagtgcgagcttggattgacgtccgagcacaagggcctgatcaatgcggcagcttt 835
|||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||
Sbjct: 431 agctgagtgcgagcttggtttaacgtccgagcacaagggtctgatcaatgcggcagcttt 490
Query: 836 cattggtataataagcacgtcgttcctgtggggctacctcggggatcgttgtggaaggcg 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 cattggtataataagcacgtcgttcctgtggggctacctcggggatcgttgtggaaggcg 550
Query: 896 cgctgttatgttgccagctatggttgcttcagctgtcttctcgatagcttcctcgttttc 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 cgctgttatgttgccagctatggttgcttcagctgtcttctcgatagcttcctcgttttc 610
Query: 956 caccaacgtctggatgctgctagttttgagattcttcactggatgcctagtgtcagcctc 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 caccaacgtctggatgctgctagttttgagattcttcactggatgcctagtgtcagcctc 670
Query: 1016 cagcgcgaccgtgtatgcgtatctcggtgagatgcacacgggctcccggcgtgcggccgc 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 671 cagcgcgaccgtgtatgcgtatctcggtgagatgcacacgggctcccggcgtgcggcggc 730
Query: 1076 gatcgcttggggttcagccttcatatctttctcctttatgatattgccagggttggcttg 1135
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 731 gatcgcttggggttcagccttcatatctttctcctttatgatattgccaggcttagcttg 790
Query: 1136 gttgatcatccctgggaaatggtcgttttctctactc 1172
|||||||||||||||||||||||||||||||||||||
Sbjct: 791 gttgatcatccctgggaaatggtcgttttctctactc 827
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 223,808
Number of extensions: 4672
Number of successful extensions: 4672
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4672
Number of HSP's successfully gapped: 1
Length of query: 2051
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2034
Effective length of database: 8,119,229
Effective search space: 16514511786
Effective search space used: 16514511786
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)