BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18837 (UTR included)
(3175 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022A2H11 1485 0.0
BF01019A1D08 777 0.0
>BF01022A2H11
Length = 761
Score = 1485 bits (749), Expect = 0.0
Identities = 758/761 (99%)
Strand = Plus / Plus
Query: 1542 aactgcggctcaggaaaatgttccaagctcctgaaggtgaaaaaagtcggcgaagggaga 1601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aactgcggctcaggaaaatgttccaagctcctgaaggtgaaaaaagtcggcgaagggaga 60
Query: 1602 tacaacatcgctggaaggaacgtctttattagattacttaaaggacgccacatgatggta 1661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacaacatcgctggaaggaacgtctttattagattacttaaaggacgccacatgatggta 120
Query: 1662 cgtgtgggcggggggtgggacaccctcgagcacttcctctcgcgtcatgagccttgtcag 1721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgtgtgggcggggggtgggacaccctcgagcacttcctctcgcgtcatgagccttgtcag 180
Query: 1722 gtgcgcctcgtgacgcagggccggcgtgacgtgcttcctgtgccgctgcccccctcccct 1781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtgcgcctcgtgacgcagggccggcgtgacgtgcttcctgtgccgctgcccccctcccct 240
Query: 1782 tctccggcgcattcacactcacctagtccctctcctctcccagcctccgccgggccttct 1841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tctccggcgcattcacactcacctagtccctctcctctcccagcctccgccgggccttct 300
Query: 1842 ccagcccacgctggcccatcacctgcacccagcagcacctctcttgccggcaccgtctct 1901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccagcccacgctggcccatcacctgcacccagcagcacctctcttgccggcaccgtctct 360
Query: 1902 cccatcgacagcaaggcatcatctattagcggcaaaacctctcccgttgatcctaagctc 1961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cccatcgacagcaaggcatcatctattagcggcaaaacctctcccgttgatcctaagctc 420
Query: 1962 gataaaactcgaactcctggcaagcccgatagcggaaagtgctccccgctccgccgcact 2021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gataaaactcgaactcctggcaagcccgatagcggaaagtgctccccgctccgccgcact 480
Query: 2022 tctacacccaataaaccagtttcatccaggaacagatctgccttgacactgcccctcaaa 2081
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 481 tctacacccaataaaccagtttcatccaggaacagatctgccttgatactgcccctcaaa 540
Query: 2082 gattcgaccgaaaagaagtccccagcaccccgagctagaaagcaatccgcaccagctagc 2141
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 541 gattcgaccgaaaagaagtccccagcaccccgagctagaaagcaatccgcaccagccagc 600
Query: 2142 ttcagcactccgaacacgccgaccggaaggtccatccggactcctcccgtcgaacttcgc 2201
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 601 ttcagcactccgaacacgccgaccggaaggtccatccggactcctcccgccgaacttcgc 660
Query: 2202 aagtcgctcacttcaaacacattaataaacgcacctaaaaaatcgagaagcatgagtcta 2261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aagtcgctcacttcaaacacattaataaacgcacctaaaaaatcgagaagcatgagtcta 720
Query: 2262 gcgagcgcccccaacaatgaaaggaaatcattttgtgggac 2302
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gcgagcgcccccaacaatgaaaggaaatcattttgtgggac 761
>BF01019A1D08
Length = 609
Score = 777 bits (392), Expect = 0.0
Identities = 410/416 (98%), Gaps = 1/416 (0%)
Strand = Plus / Plus
Query: 486 gattcataagccgtcatggcgtactaccgctgtggaccgactgctatcggcagccgcgcg 545
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 gattcataagccgtcatggcgtactaccgctgtggaccgactgctatcggcagccgcgca 253
Query: 546 tcgtggtcggtgacgactcccgagagcaaacccttcgagcgtcctctcagcgggaactac 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tcgtggtcggtgacgactcccgagagcaaacccttcgagcgtcctctcagcgggaactac 313
Query: 606 gacaggatcttcaacgccttcgagagaacaaacgccttcgagtacgtcaggagcaccttc 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gacaggatcttcaacgccttcgagagaacaaacgccttcgagtacgtcaggagcaccttc 373
Query: 666 gaagggaaaccagaagagaggcatgttggacacggagacgtagtggttaataggaagatg 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gaagggaaaccagaagagaggcatgttggacacggagacgtagtggttaataggaagatg 433
Query: 726 tccagtagctttgaacgagcggactgcgccctggccgcgcagacgccttgctctgacgat 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tccagtagctttgaacgagcggactgcgccctggccgcgcagacgccttgctctgacgat 493
Query: 786 gaggacttttatagggagaagatattgtactcgcaaaccaggcagctgtttcctctgcaa 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gaggacttttatagggagaagatattgtactcgcaaaccaggcagctgtttcctctgcaa 553
Query: 846 gaagatttggctgattggatcaataaaactataggcatca-cctacctgaacgggg 900
|| | ||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 554 gangnnntggctgattggatcaataaaactataggcatcaccctacctgaacgggg 609
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 261,207
Number of extensions: 4389
Number of successful extensions: 4389
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4386
Number of HSP's successfully gapped: 2
Length of query: 3175
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3157
Effective length of database: 8,109,745
Effective search space: 25602464965
Effective search space used: 25602464965
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)