BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18845 (UTR included)
(1525 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01017B1A03 1479 0.0
BF01021A2F10 70 1e-11
BF01010B2F01 68 4e-11
>BF01017B1A03
Length = 770
Score = 1479 bits (746), Expect = 0.0
Identities = 765/770 (99%), Gaps = 1/770 (0%)
Strand = Plus / Plus
Query: 310 tatttaataaattaaataaacagttt-aggagatatatttcaagacctactgtcggtaaa 368
|||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||
Sbjct: 1 tatttaataaattaaataaacaattttaggacatatatttcaagacctactgtcggtaaa 60
Query: 369 attacaggtcaatcttataccagattataaacaaaagtagtaatggcgaacgatacgccg 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attacaggtcaatcttataccagattataaacaaaagtagtaatggcgaacgatacgccg 120
Query: 429 gaaagtgatttttcaatagaatgtttccaaaactactcagctccagaagtttttgtgcaa 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaaagtgatttttcaatagaatgtttccaaaactactcagctccagaagtttttgtgcaa 180
Query: 489 ggtcttgctggtatggtagatcaaactgacgtggaagtaataataagggcacaaaaaact 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtcttgctggtatggtagatcaaactgacgtggaagtaataataagggcacaaaaaact 240
Query: 549 atgttacaacgctttgaaaagacaacagaaatgttgacaaactgtaatcagctgtctgcc 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgttacaacgctttgaaaagacaacagaaatgttgacaaactgtaatcagctgtctgcc 300
Query: 609 agccggctccgagctgcctccgtggagtttaagaaacacacgcaacttctaatggatatg 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agccggctccgagctgcctccgtggagtttaagaaacacacgcaacttctaatggatatg 360
Query: 669 aaaaaggacttagaatttatatttaagaaaataagagcaattaaaactaagttaagcaca 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaaaaggacttagaatttatatttaagaaaataagagcaattaaaactaagttaagcaca 420
Query: 729 cagtatccagaagcttataaagaagctcttgcactagctgaggcaagtaggaatcccatc 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cagtatccagaagcttataaagaagctcttgcactagctgaggcaagtaggaatcccatc 480
Query: 789 gaaactgaagagtctttaccaacagaaaataaaatagaatccaagatggtggccacagtg 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaaactgaagagtctttaccaacagaaaataaaatagaatccaagatggtggccacagtg 540
Query: 849 tctacggagacactgaaaccgatcaatgataagaaattaaaaaagagaaatgtaaaggtc 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tctacggagacactgaaaccgatcaatgataagaaattaaaaaagagaaatgtaaaggtc 600
Query: 909 atcggagagagaaatgacggaagtactgtggacacattgcggaaaataaagagtagctcg 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atcggagagagaaatgacggaagtactgtggacacattgcggaaaataaagagtagctcg 660
Query: 969 tcttcagaaacggagagcgccagttccggtgatgaaagtagtaccgacacgggttgatca 1028
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 661 tcttcagaaacggagagcgccagttccggtgatgaaagtagtaccgacaccggttgatca 720
Query: 1029 acacgtggtatattttgttggcctacctcatttatgtccggcttaaactt 1078
||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 721 acacgtggtatattttgttggcctacctcatttatgtccagcttaaactt 770
>BF01021A2F10
Length = 792
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 196 actcgtattcagagccgtaaaaacatttacaaaaaaaaa 234
|||||||| ||||||||||||||||||||||||||||||
Sbjct: 85 actcgtatccagagccgtaaaaacatttacaaaaaaaaa 47
>BF01010B2F01
Length = 839
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 196 actcgtattcagagccgtaaaaacatttacaaaaaaaa 233
|||||||||||||||||||||||||||||||| |||||
Sbjct: 548 actcgtattcagagccgtaaaaacatttacaataaaaa 511
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 231,826
Number of extensions: 5137
Number of successful extensions: 5137
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5136
Number of HSP's successfully gapped: 3
Length of query: 1525
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1508
Effective length of database: 8,119,229
Effective search space: 12243797332
Effective search space used: 12243797332
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)