BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18857 (UTR included)
(2473 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1912_C1 724 0.0
BF01059A2E06 68 7e-11
>BF14_1912_C1
Length = 1395
Score = 724 bits (365), Expect = 0.0
Identities = 380/385 (98%)
Strand = Plus / Plus
Query: 1568 gagcaacatgaccgccatcgtgaggctggctctgggacacgcggtcatacccagcgacca 1627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagcaacatgaccgccatcgtgaggctggctctgggacacgcggtcatacccagcgacca 60
Query: 1628 ccagctcgactacgccccgaaacagctgcccaagccggacaccgctccgtccccgcagat 1687
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 61 ccagctcgactacgccccaaaacagctgcccaagccagacaccgctccttccccgcagat 120
Query: 1688 cgagcttccagagctgagcccgtccctgctggagctggtgtgctcgcaggcgcccaccag 1747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgagcttccagagctgagcccgtccctgctggagctggtgtgctcgcaggcgcccaccag 180
Query: 1748 gagcgacctcggccagcagctgtccacagccaggccgctgttcagtgacaggaccaaggc 1807
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 181 gagcgacctcggccagcagctgtccacagccaggccgctgttcagtgacaggactaaggc 240
Query: 1808 tatagtgtggggaatgcagaacagagctatacagggtatgctcgacttcgactacgtgtg 1867
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 241 tatagtgtggggaatgcagaacagggctatacagggtatgctcgacttcgactacgtgtg 300
Query: 1868 tcgccgcagtgagccgtcagtggtggccatagtgtaccccttcaccgctgaccacaaaca 1927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcgccgcagtgagccgtcagtggtggccatagtgtaccccttcaccgctgaccacaaaca 360
Query: 1928 gaagtactacttcggcactaaggaa 1952
|||||||||||||||||||||||||
Sbjct: 361 gaagtactacttcggcactaaggaa 385
>BF01059A2E06
Length = 702
Score = 67.9 bits (34), Expect = 7e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 2419 gcggcttttacagcgtcaccggaag-gagggccggtgctgagaccggctcgtta 2471
||||||||||||||||||||||||| | |||||||||||| ||||||| |||||
Sbjct: 652 gcggcttttacagcgtcaccggaagagtgggccggtgctgggaccggcccgtta 599
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 234,764
Number of extensions: 16735
Number of successful extensions: 16735
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 16734
Number of HSP's successfully gapped: 2
Length of query: 2473
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2456
Effective length of database: 8,119,229
Effective search space: 19940826424
Effective search space used: 19940826424
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)