BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18877 (UTR included)
(1945 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1307_C1 2718 0.0
>BF14_1307_C1
Length = 1594
Score = 2718 bits (1371), Expect = 0.0
Identities = 1387/1391 (99%), Gaps = 1/1391 (0%)
Strand = Plus / Plus
Query: 525 ttcgccgtggaggtcatggctacactcatccaagagaatggtatgaagttgagcaaagga 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ttcgccgtggaggtcatggctacactcatccaagagaatggtatgaagttgagcaaagga 264
Query: 585 acccatggtgtagtcgttaaccatggcatgacgacgcacggtgtcccaaatcacatggtg 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acccatggtgtagtcgttaaccatggcatgacgacgcacggtgtcccaaatcacatggtg 324
Query: 645 ccagaccatgaatactgtgaatcgggtcaggccgagcaacccgcacaacagtgcctcgac 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccagaccatgaatactgtgaatcgggtcaggccgagcaacccgcacaacagtgcctcgac 384
Query: 705 gcggagagcgagccgcatcagccgcccgtcgaggaggaggaggaaaccccagaaattgac 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcggagagcgagccgcatcagccgcccgtcgaggaggaggaggaaaccccagaaattgac 444
Query: 765 ataatgataaacaatgttgtgtgcagttttagtgttaagtgtcacctgaacctgagacag 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ataatgataaacaatgttgtgtgcagttttagtgttaagtgtcacctgaacctgagacag 504
Query: 825 atcgctttaaacggtgttaatgttgagttcagacgggagaacggaatggttactatgaaa 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atcgctttaaacggtgttaatgttgagttcagacgggagaacggaatggttactatgaaa 564
Query: 885 ctccggcgtccatacaccacggcctctatatggtcctctggtcgggtcacgtgcacgggc 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctccggcgtccatacaccacggcctctatatggtcctctggtcgggtcacgtgcacgggc 624
Query: 945 gccactagcgaggatcaagctaaagtggccgcccgccgctacgcacgtgccctacagaag 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gccactagcgaggatcaagctaaagtggccgcccgccgctacgcacgtgccctacagaag 684
Query: 1005 ttgggcttccaagtacgctttcgcaactttcgtgttgtaaacgtactcggaacttgtagg 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttgggcttccaagtacgctttcgcaactttcgtgttgtaaacgtactcggaacttgtagg 744
Query: 1065 atgccctttggcattcgaattatagcattctcaaagaaatacaaagaagcagactatgag 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atgccctttggcattcgaattatagcattctcaaagaaatacaaagaagcagactatgag 804
Query: 1125 cctgaacttcatcccggggtaacatacaagttgtacaatcccaaggcgactctcaagata 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 cctgaacttcatcccggggtaacatacaagttgtacaatcccaaggcgactctcaagata 864
Query: 1185 ttttccaccggtggtgtgacaataactgctcgaagcgttagcgatgtccagtcggccgta 1244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 ttttccaccggtggtgtgacaataactgctcgaagcgttagcgatgtccagtcggccgta 924
Query: 1245 gagcgcatcttcccgctggtgtacgagttccgtaagcctcactcgcccgccgatgaggag 1304
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 925 gagcgcatcttcccgctggtatacgagttccgtaagcctcactcgcccgccgatgaggag 984
Query: 1305 aagctgcgtcagaggcgggcggcgcgatcgcggggcgccggcccacaacccgcagaggag 1364
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 985 aagctgcgtcagaggcgggcggcgcgatcgcggggcgccggcccaccacccgcagaggag 1044
Query: 1365 cggccccttgaacaagctgcaccacagactgacgaccccatgcacctggtcacactgtcc 1424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1045 cggccccttgaacaagctgcaccacagactgacgaccccatgcacctggtcacactgtcc 1104
Query: 1425 gacgacgacgcctgggagtgaccaccctccccccaccaccagcccccaccacccggccaa 1484
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1105 gacgacgacgcctgggagtgaccaccctccccccaccaccagcccccaccaccc-gccaa 1163
Query: 1485 agcgacggactccatccagcaataactgacggttgttagtgtgatcgattctcggcgagc 1544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164 agcgacggactccatccagcaataactgacggttgttagtgtgatcgattctcggcgagc 1223
Query: 1545 ttcttcggttcatgccaaagatatttattagaggtgctttgcgctcgtcgcccggacctc 1604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1224 ttcttcggttcatgccaaagatatttattagaggtgctttgcgctcgtcgcccggacctc 1283
Query: 1605 tcggttcctctgcgcggttgttatgtatatgttgtgtactcgattgctcgcccccctccc 1664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1284 tcggttcctctgcgcggttgttatgtatatgttgtgtactcgattgctcgcccccctccc 1343
Query: 1665 gacctcctcccccctctccgccgggaggcgcggtcggttcgtttgattcgataccaaatt 1724
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1344 gacctcctcccccctctccgccgggaggcgcggtcggttcttttgattcgataccaaatt 1403
Query: 1725 gtctcagttgataaaaattatgagataataaatctctttaccgatactcaagtctcgttt 1784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1404 gtctcagttgataaaaattatgagataataaatctctttaccgatactcaagtctcgttt 1463
Query: 1785 tttttatttgcagttgtgatttatgaattgtagtgataatagtgttcgcgataatgttct 1844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1464 tttttatttgcagttgtgatttatgaattgtagtgataatagtgttcgcgataatgttct 1523
Query: 1845 aagaaagtaatgactgaatgttagttagacgttagtgattgtaaatacgaaagctttaga 1904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1524 aagaaagtaatgactgaatgttagttagacgttagtgattgtaaatacgaaagctttaga 1583
Query: 1905 cattatacatt 1915
|||||||||||
Sbjct: 1584 cattatacatt 1594
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 239,121
Number of extensions: 5877
Number of successful extensions: 5877
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5876
Number of HSP's successfully gapped: 1
Length of query: 1945
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1928
Effective length of database: 8,119,229
Effective search space: 15653873512
Effective search space used: 15653873512
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)