BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18903 (UTR included)
(1846 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 133 1e-30
BF01031B2E06 101 4e-21
>BF14_335_C2
Length = 1827
Score = 133 bits (67), Expect = 1e-30
Identities = 218/265 (82%), Gaps = 10/265 (3%)
Strand = Plus / Minus
Query: 1531 catatttatgtattcgtgaattttaaagcgcgttgtgataatagagctgacggtaccttg 1590
||||||| |||||||| ||||||||||||||| | | ||||||||| ||||| |||||
Sbjct: 1276 catatttctgtattcgcgaattttaaagcgcgctacgctaatagagcctacggttccttg 1217
Query: 1591 ggaaaccagcatccccaaagaccataccatcaaggtcaactagtattacgaactagctaa 1650
| | |||| |||||||||| ||||| |||||||||||||| ||||||| || || |||
Sbjct: 1216 gaagaccaacatccccaaaaaccatgccatcaaggtcaacaagtattatgagctcactag 1157
Query: 1651 gaataggttcgtcgt-aaattagtacgcgttagaagtagga------gtgagaggtataa 1703
|||||||||||| | ||||| ||||| | ||||||| ||| | |||||||||||
Sbjct: 1156 gaataggttcgtaataaaatttgtacgtggtagaagtgggagaaagtgagagaggtataa 1097
Query: 1704 cggctaaa--tctctacaacctgctaaaa-actttgtcctgtcaagaactaacatcagtt 1760
| |||||| |||||||| ||| |||||| |||| | |||||| |||||||||| |||||
Sbjct: 1096 cagctaaatctctctacagcctactaaaatacttgggcctgtccagaactaacaccagtt 1037
Query: 1761 cattcttggaacgtgcgtcgaagac 1785
||||||| |||||| | ||||||||
Sbjct: 1036 cattcttcgaacgtacttcgaagac 1012
>BF01031B2E06
Length = 707
Score = 101 bits (51), Expect = 4e-21
Identities = 143/170 (84%), Gaps = 4/170 (2%)
Strand = Plus / Plus
Query: 1592 gaaaccagcatccccaaagaccataccatcaaggtcaactagtattacgaa-ctagctaa 1650
||||||| |||||||||||||||| |||||||| |||| ||||||||||| || ||||
Sbjct: 436 gaaaccaacatccccaaagaccatgccatcaagatcaataagtattacgaagctcactaa 495
Query: 1651 gaataggttcgtcgtaaattagtacgcgttagaagtaggagtgagaggtataacggctaa 1710
|||||||||||| | ||||| ||||||| ||||||| |||| ||| | | ||| |||||
Sbjct: 496 gaataggttcgtggcaaatttgtacgcggtagaagtgggagcgagcgttgtaaaagctaa 555
Query: 1711 atctct--acaacctgctaaaaa-ctttgtcctgtcaagaactaacatca 1757
|||||| ||||||| ||||||| ||| | |||||| ||| |||||||||
Sbjct: 556 atctctccacaacctactaaaaaccttgggcctgtccagatctaacatca 605
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 202,769
Number of extensions: 3911
Number of successful extensions: 3911
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3909
Number of HSP's successfully gapped: 3
Length of query: 1846
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1829
Effective length of database: 8,119,229
Effective search space: 14850069841
Effective search space used: 14850069841
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)