BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN18916 (UTR included)
         (1887 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01011A1H06                                                           98   6e-20
BF01017A2H11                                                           90   2e-17
BF14_729_C3                                                            88   6e-17

>BF01011A1H06
          Length = 739

 Score = 97.6 bits (49), Expect = 6e-20
 Identities = 65/69 (94%), Gaps = 1/69 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1820 ttgataaataaca-ggaccaactgacagacactcacatctcgtctgcccgtgatcactgt 1878
            ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 423  ttgatgaataacaaggaccaactgacagacactcacatctcgtctgcccgtgatcacggt 482

                     
Query: 1879 tgctgaaaa 1887
            | |||||||
Sbjct: 483  tactgaaaa 491


>BF01017A2H11
          Length = 713

 Score = 89.7 bits (45), Expect = 2e-17
 Identities = 51/53 (96%)
 Strand = Plus / Plus

                                                                 
Query: 1835 accaactgacagacactcacatctcgtctgcccgtgatcactgttgctgaaaa 1887
            ||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 12   accaactgacatacactcacatctcgtctgcccgtgatcacggttgctgaaaa 64


>BF14_729_C3
          Length = 2041

 Score = 87.7 bits (44), Expect = 6e-17
 Identities = 60/64 (93%), Gaps = 1/64 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1821 tgataaataaca-ggaccaactgacagacactcacatctcgtctgcccgtgatcactgtt 1879
            |||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||| |||
Sbjct: 1552 tgataaataacaaggaccaactgacagacattcacacctcgtctgcccgtgatcacggtt 1611

                
Query: 1880 gctg 1883
            ||||
Sbjct: 1612 gctg 1615


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 195,525
Number of extensions: 3519
Number of successful extensions: 3519
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 3518
Number of HSP's successfully gapped: 3
Length of query: 1887
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1870
Effective length of database: 8,119,229
Effective search space: 15182958230
Effective search space used: 15182958230
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)