BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18945 (UTR included)
(1354 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033A1B08 1522 0.0
>BF01033A1B08
Length = 787
Score = 1522 bits (768), Expect = 0.0
Identities = 774/776 (99%)
Strand = Plus / Plus
Query: 487 gtgtatcatctgaaatggcgagtcagacacaggggatccagcaattgttggctgctgaga 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gtgtatcatctgaaatggcgagtcagacacaggggatccagcaattgttggctgctgaga 71
Query: 547 aacgcgcagcagaaaaagtctctgaggccaggaagcgaaaagcaaaacgtctaaagcagg 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 aacgcgcagcagaaaaagtctctgaggccaggaagcgaaaagcaaaacgtctaaagcagg 131
Query: 607 ctaaggaagaggctcaggatgaggtggagaagtacagacaggagcgggagaggcagttta 666
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ctaaggaggaggctcaggatgaggtggagaagtacagacaggagcgggagaggcagttta 191
Query: 667 aagatttcgaagccaagcacatgggcacaagggagggagtcgccgccaaaattgatgctg 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 aagatttcgaagccaagcacatgggcacaagggagggagtcgccgccaaaattgatgctg 251
Query: 727 agaccagagtgaaaatcgatgagatgaacaaattggtccagatgcaacaggaaacggtga 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 agaccagagtgaaaatcgatgagatgaacaaattggtccagatgcaacaggaaacggtga 311
Query: 787 tcacagacatcctgaatcttgtgtacgacatcaagccggaacttcacgtcaactaccgct 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tcacagacatcctgaatcttgtgtacgacatcaagccggaacttcacgtcaactaccgct 371
Query: 847 tagaataagcgaaacacaataataattaatgttacttctttcgcttttaaaaccgtcgcg 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tagaataagcgaaacacaataataattaatgttacttctttcgcttttaaaaccgtcgcg 431
Query: 907 aacctagttgtcactgttataattaattaatagccacttttggcgtgcgtcaaatttcgc 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aacctagttgtcactgttataattaattaatagccacttttggcgtgcgtcaaatttcgc 491
Query: 967 gccaaacaaaatggctgccgtatgctgtatatacagatagcttaaagccatttaatattt 1026
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gccaaacaaaatggctgtcgtatgctgtatatacagatagcttaaagccatttaatattt 551
Query: 1027 attatcctaaacatttaattataatcagctcgatatcattccatttgtgaccttggagga 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 attatcctaaacatttaattataatcagctcgatatcattccatttgtgaccttggagga 611
Query: 1087 tccgcttacgaacacaaaaaaaaatataaatatatattattaaattgtatgttattcaat 1146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tccgcttacgaacacaaaaaaaaatataaatatatattattaaattgtatgttattcaat 671
Query: 1147 gttatatgttgaatagaaatatatggagttttaaaattaatattaatgtttttatttttg 1206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gttatatgttgaatagaaatatatggagttttaaaattaatattaatgtttttatttttg 731
Query: 1207 cgtgttacatttagtctcaattgcttgtacagtattagaagaaatatattaataaa 1262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 cgtgttacatttagtctcaattgcttgtacagtattagaagaaatatattaataaa 787
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 243,721
Number of extensions: 6820
Number of successful extensions: 6820
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6820
Number of HSP's successfully gapped: 1
Length of query: 1354
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1337
Effective length of database: 8,119,229
Effective search space: 10855409173
Effective search space used: 10855409173
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)