BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18947 (UTR included)
(1525 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01013B2E01 1017 0.0
>BF01013B2E01
Length = 680
Score = 1017 bits (513), Expect = 0.0
Identities = 528/533 (99%)
Strand = Plus / Plus
Query: 496 agacaatggccagccatcttttgcgccgagcgctgtttgatgctatccgtgtcccagctg 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 29 agacaatggccagccatcttttgcgccgagcgctgtttgatgctatccgtgtcccggccg 88
Query: 556 gaacccgtgcagcgagtgaaattgccaagatcggcgatcgtgagtgggtgggctatggtt 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 gaacccgtgcagcgagtgaaattgccaagatcggcgatcgtgagtgggtgggctatggtt 148
Query: 616 tcaatggccgtcctaattacgtagacaggaacgatttccccttacccgctgttaggttca 675
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tcaatggccgtcctaattatgtagacaggaacgatttccccttacccgctgttaggttca 208
Query: 676 gggctgacacacccgatgttaaggctctccgtgaaaaggaaaagggagactggcgtaagt 735
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 209 gggctgacacacccgatgttaaggcactccgtgaaaaggaaaagggagactggcgtaagt 268
Query: 736 tgaccctggaggagaagaaagccttgtaccgagcttcattctgtcagacgtttgccgagt 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tgaccctggaggagaagaaagccttgtaccgagcttcattctgtcagacgtttgccgagt 328
Query: 796 tccaagcacccaccggggagtggaagggagcgctcggctgggcgcttgttatggcgtcca 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tccaagcacccaccggggagtggaagggagcgctcggctgggcgcttgttatggcgtcca 388
Query: 856 tgtctttatggttctacatggccatgaagaagtttgtatacaaccccttgcccgagtcct 915
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 389 tgtctttatggttctacatggccatgaagaagtttgtatacaaccccttgcctgagtcct 448
Query: 916 tcagcgaggagtctcagaaggcgcagctgaaacgtatgttggacttgaaggtgaaccctg 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tcagcgaggagtctcagaaggcgcagctgaaacgtatgttggacttgaaggtgaaccctg 508
Query: 976 tggacggcctctcctccaagtgggactacgagaacaaccgctggaagtaaatg 1028
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tggacggcctctcctccaagtgggactacgagaacaaccgctggaagtaaatg 561
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 191,474
Number of extensions: 4053
Number of successful extensions: 4053
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4053
Number of HSP's successfully gapped: 1
Length of query: 1525
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1508
Effective length of database: 8,119,229
Effective search space: 12243797332
Effective search space used: 12243797332
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)