BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18948 (UTR included)
(3514 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044A2B02 634 0.0
>BF01044A2B02
Length = 669
Score = 634 bits (320), Expect = 0.0
Identities = 333/336 (99%), Gaps = 1/336 (0%)
Strand = Plus / Plus
Query: 3179 acttataattcttcaaaatttcgatgtttgtagattctacgctaacaaattttgttattt 3238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acttataattcttcaaaatttcgatgtttgtagattctacgctaacaaattttgttattt 60
Query: 3239 tggaaaacatagcaagcttatacaaagtactatatccaaaactgaagcgtctgtaatggt 3298
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 61 tggaaaacatagcaagcttatacaa-gtactatatccaaaactgaagcgtctgtaatagt 119
Query: 3299 agaaacctttttttaggtaacgtttagaaagggtcgtagtgttaccaacacgctcggaca 3358
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 agaaaactttttttaggtaacgtttagaaagggtcgtagtgttaccaacacgctcggaca 179
Query: 3359 gttcgctttgaacctcggagtcgccacacacaccagtcattacgtcaaataattaatatt 3418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gttcgctttgaacctcggagtcgccacacacaccagtcattacgtcaaataattaatatt 239
Query: 3419 tccaaaagcttcttaatgtagtcatttcttcttatctctagtttctagtcgtctcgtgag 3478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tccaaaagcttcttaatgtagtcatttcttcttatctctagtttctagtcgtctcgtgag 299
Query: 3479 ttttttgaattccttaataaattagacaatgaagcg 3514
||||||||||||||||||||||||||||||||||||
Sbjct: 300 ttttttgaattccttaataaattagacaatgaagcg 335
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 293,865
Number of extensions: 4992
Number of successful extensions: 4992
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4991
Number of HSP's successfully gapped: 1
Length of query: 3514
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3496
Effective length of database: 8,109,745
Effective search space: 28351668520
Effective search space used: 28351668520
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)